Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc28bQ8CEG5 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc28bQ8CEG5 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc28bQ8CEG5 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc28bQ8CEG5 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc28bQ8CEG5 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.27□□□□□ -0.12
Ccdc28bQ8CEG5 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc28bQ8CEG5 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccdc28bQ8CEG5 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc28bQ8CEG5 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccdc28bQ8CEG5 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.27□□□□□ -0.13
Ccdc28bQ8CEG5 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccdc28bQ8CEG5 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc28bQ8CEG5 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc28bQ8CEG5 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc28bQ8CEG5 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc28bQ8CEG5 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc28bQ8CEG5 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc28bQ8CEG5 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc28bQ8CEG5 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc28bQ8CEG5 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc28bQ8CEG5 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc28bQ8CEG5 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccdc28bQ8CEG5 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc28bQ8CEG5 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc28bQ8CEG5 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc28bQ8CEG5 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc28bQ8CEG5 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc28bQ8CEG5 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc28bQ8CEG5 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc28bQ8CEG5 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Gm9682-201ENSMUST00000197505 556 ntBASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc28bQ8CEG5 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Gm8749-201ENSMUST00000117737 331 ntBASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc28bQ8CEG5 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc28bQ8CEG5 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms