Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Gm18057-201ENSMUST00000208220 503 ntBASIC17.03■□□□□ 0.32
Nup88Q8CEC0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nup88Q8CEC0 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nup88Q8CEC0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nup88Q8CEC0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nup88Q8CEC0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Nup88Q8CEC0 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Nup88Q8CEC0 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nup88Q8CEC0 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.02■□□□□ 0.31
Nup88Q8CEC0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nup88Q8CEC0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Nup88Q8CEC0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nup88Q8CEC0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm22065-201ENSMUST00000103753 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm22066-201ENSMUST00000103761 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm24932-201ENSMUST00000103763 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm24115-201ENSMUST00000103799 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm22190-201ENSMUST00000103827 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm22191-201ENSMUST00000103831 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm24721-201ENSMUST00000103849 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm28018-201ENSMUST00000103869 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm26399-201ENSMUST00000103937 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm25948-201ENSMUST00000175334 112 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm25349-201ENSMUST00000177728 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm23616-201ENSMUST00000177797 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm25871-201ENSMUST00000177816 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm24752-201ENSMUST00000178240 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm24496-201ENSMUST00000178287 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm25649-201ENSMUST00000178476 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm25548-201ENSMUST00000178681 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm23147-201ENSMUST00000178841 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm26095-201ENSMUST00000179270 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm22171-201ENSMUST00000179283 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm23936-201ENSMUST00000179354 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm22619-201ENSMUST00000179516 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm25255-201ENSMUST00000179579 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm24755-201ENSMUST00000179691 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm26506-201ENSMUST00000179692 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm25086-201ENSMUST00000179931 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm23243-201ENSMUST00000180047 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm24659-201ENSMUST00000180212 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm24169-201ENSMUST00000180244 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm23689-201ENSMUST00000180354 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm27359-201ENSMUST00000184153 110 ntBASIC17.01■□□□□ 0.31
Nup88Q8CEC0 Gm27785-201ENSMUST00000184268 110 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms