Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.98□□□□□ -0.17
SynpoQ8CC35 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.97□□□□□ -0.17
SynpoQ8CC35 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.97□□□□□ -0.17
SynpoQ8CC35 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.97□□□□□ -0.17
SynpoQ8CC35 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.97□□□□□ -0.17
SynpoQ8CC35 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.97□□□□□ -0.17
SynpoQ8CC35 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SynpoQ8CC35 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SynpoQ8CC35 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SynpoQ8CC35 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.96□□□□□ -0.17
SynpoQ8CC35 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.96□□□□□ -0.17
SynpoQ8CC35 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SynpoQ8CC35 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SynpoQ8CC35 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SynpoQ8CC35 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SynpoQ8CC35 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SynpoQ8CC35 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SynpoQ8CC35 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SynpoQ8CC35 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
SynpoQ8CC35 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.96□□□□□ -0.17
SynpoQ8CC35 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SynpoQ8CC35 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.96□□□□□ -0.17
SynpoQ8CC35 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SynpoQ8CC35 AA543401-201ENSMUST00000164248 1269 ntBASIC13.96□□□□□ -0.17
SynpoQ8CC35 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SynpoQ8CC35 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.96□□□□□ -0.17
SynpoQ8CC35 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.96□□□□□ -0.17
SynpoQ8CC35 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.96□□□□□ -0.17
SynpoQ8CC35 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.96□□□□□ -0.17
SynpoQ8CC35 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SynpoQ8CC35 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SynpoQ8CC35 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
SynpoQ8CC35 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.96□□□□□ -0.17
SynpoQ8CC35 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
SynpoQ8CC35 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SynpoQ8CC35 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SynpoQ8CC35 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SynpoQ8CC35 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SynpoQ8CC35 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SynpoQ8CC35 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SynpoQ8CC35 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SynpoQ8CC35 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SynpoQ8CC35 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
SynpoQ8CC35 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.96□□□□□ -0.18
SynpoQ8CC35 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.95□□□□□ -0.18
SynpoQ8CC35 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SynpoQ8CC35 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms