Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Usp44Q8C2S0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Gm15957-201ENSMUST00000118893 974 ntBASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Usp44Q8C2S0 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp44Q8C2S0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Usp44Q8C2S0 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.86■□□□□ 0.29
Usp44Q8C2S0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp44Q8C2S0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Usp44Q8C2S0 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Usp44Q8C2S0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Usp44Q8C2S0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp44Q8C2S0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.86■□□□□ 0.29
Usp44Q8C2S0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.86■□□□□ 0.29
Usp44Q8C2S0 AA619741-201ENSMUST00000195095 646 ntBASIC16.86■□□□□ 0.29
Usp44Q8C2S0 Gm5867-201ENSMUST00000063197 592 ntBASIC16.86■□□□□ 0.29
Usp44Q8C2S0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp44Q8C2S0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp44Q8C2S0 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp44Q8C2S0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp44Q8C2S0 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp44Q8C2S0 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Usp44Q8C2S0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Usp44Q8C2S0 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Usp44Q8C2S0 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp44Q8C2S0 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.86■□□□□ 0.29
Usp44Q8C2S0 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.86■□□□□ 0.29
Usp44Q8C2S0 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.86■□□□□ 0.29
Usp44Q8C2S0 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp44Q8C2S0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Gm16476-201ENSMUST00000221544 139 ntBASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp44Q8C2S0 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.84■□□□□ 0.29
Usp44Q8C2S0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms