Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Gm12928-201ENSMUST00000117115 573 ntBASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Gm13350-201ENSMUST00000120519 479 ntBASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ttc28Q80XJ3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ttc28Q80XJ3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ttc28Q80XJ3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.48
Ttc28Q80XJ3 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.02□□□□□ -0.48
Ttc28Q80XJ3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.02□□□□□ -0.48
Ttc28Q80XJ3 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.02□□□□□ -0.48
Ttc28Q80XJ3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ttc28Q80XJ3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.02□□□□□ -0.48
Ttc28Q80XJ3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Ttc28Q80XJ3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ttc28Q80XJ3 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ttc28Q80XJ3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ttc28Q80XJ3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ttc28Q80XJ3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ttc28Q80XJ3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.02□□□□□ -0.48
Ttc28Q80XJ3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ttc28Q80XJ3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ttc28Q80XJ3 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ttc28Q80XJ3 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ttc28Q80XJ3 Gm22018-201ENSMUST00000104357 131 ntBASIC12.01□□□□□ -0.49
Ttc28Q80XJ3 Gm15376-201ENSMUST00000122258 783 ntBASIC12.01□□□□□ -0.49
Ttc28Q80XJ3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.01□□□□□ -0.49
Ttc28Q80XJ3 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.01□□□□□ -0.49
Ttc28Q80XJ3 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.01□□□□□ -0.49
Ttc28Q80XJ3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ttc28Q80XJ3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.01□□□□□ -0.49
Ttc28Q80XJ3 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms