Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm3Q80WV7 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm3Q80WV7 Gm4535-201ENSMUST00000182274 558 ntBASIC15.04■□□□□ -0
Srrm3Q80WV7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.04■□□□□ -0
Srrm3Q80WV7 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.04■□□□□ -0
Srrm3Q80WV7 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.04■□□□□ -0
Srrm3Q80WV7 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Srrm3Q80WV7 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.04■□□□□ -0
Srrm3Q80WV7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm3Q80WV7 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm3Q80WV7 Gm10355-201ENSMUST00000097146 517 ntBASIC15.04■□□□□ -0
Srrm3Q80WV7 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm3Q80WV7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.04■□□□□ -0
Srrm3Q80WV7 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Srrm3Q80WV7 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm3Q80WV7 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.04■□□□□ -0
Srrm3Q80WV7 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm3Q80WV7 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm3Q80WV7 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Srrm3Q80WV7 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.03■□□□□ -0
Srrm3Q80WV7 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm3Q80WV7 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm3Q80WV7 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Srrm3Q80WV7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm3Q80WV7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.03■□□□□ -0
Srrm3Q80WV7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm3Q80WV7 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Srrm3Q80WV7 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.03■□□□□ -0
Srrm3Q80WV7 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Srrm3Q80WV7 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.03■□□□□ -0
Srrm3Q80WV7 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm3Q80WV7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.03■□□□□ -0
Srrm3Q80WV7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.03■□□□□ -0
Srrm3Q80WV7 Gm27628-201ENSMUST00000184911 107 ntBASIC15.03■□□□□ -0
Srrm3Q80WV7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.03■□□□□ -0
Srrm3Q80WV7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm3Q80WV7 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.03■□□□□ -0
Srrm3Q80WV7 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Srrm3Q80WV7 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm3Q80WV7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm3Q80WV7 Grk6-207ENSMUST00000225925 2769 ntBASIC15.03■□□□□ -0
Srrm3Q80WV7 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.03■□□□□ -0
Srrm3Q80WV7 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.03■□□□□ -0
Srrm3Q80WV7 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm3Q80WV7 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.03■□□□□ -0
Srrm3Q80WV7 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.03■□□□□ -0
Srrm3Q80WV7 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm3Q80WV7 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.03■□□□□ -0
Srrm3Q80WV7 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm3Q80WV7 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm3Q80WV7 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm3Q80WV7 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Srrm3Q80WV7 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Srrm3Q80WV7 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Srrm3Q80WV7 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Srrm3Q80WV7 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Srrm3Q80WV7 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Srrm3Q80WV7 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Srrm3Q80WV7 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Srrm3Q80WV7 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Srrm3Q80WV7 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Srrm3Q80WV7 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Srrm3Q80WV7 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.02■□□□□ -0
Srrm3Q80WV7 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.02■□□□□ -0
Srrm3Q80WV7 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Srrm3Q80WV7 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Srrm3Q80WV7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Srrm3Q80WV7 Mir3113-201ENSMUST00000175478 76 ntBASIC15.02■□□□□ -0
Srrm3Q80WV7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.02■□□□□ -0
Srrm3Q80WV7 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Srrm3Q80WV7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.02■□□□□ -0
Srrm3Q80WV7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Srrm3Q80WV7 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Srrm3Q80WV7 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Srrm3Q80WV7 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Srrm3Q80WV7 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Srrm3Q80WV7 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Srrm3Q80WV7 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Srrm3Q80WV7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Srrm3Q80WV7 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Srrm3Q80WV7 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Srrm3Q80WV7 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Srrm3Q80WV7 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Srrm3Q80WV7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Srrm3Q80WV7 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Srrm3Q80WV7 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Srrm3Q80WV7 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.01□□□□□ -0.01
Srrm3Q80WV7 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm3Q80WV7 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm3Q80WV7 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
Srrm3Q80WV7 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm3Q80WV7 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm3Q80WV7 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm3Q80WV7 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm3Q80WV7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm3Q80WV7 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm3Q80WV7 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm3Q80WV7 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Srrm3Q80WV7 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm3Q80WV7 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms