Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sh3tc2Q80VA5 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.71■□□□□ 0.11
Sh3tc2Q80VA5 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.71■□□□□ 0.11
Sh3tc2Q80VA5 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sh3tc2Q80VA5 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sh3tc2Q80VA5 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sh3tc2Q80VA5 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Efs-202ENSMUST00000227037 2540 ntBASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sh3tc2Q80VA5 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Gm22189-201ENSMUST00000103822 86 ntBASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Gm9522-201ENSMUST00000182394 926 ntBASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Sh3tc2Q80VA5 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Mir7085-201ENSMUST00000184353 66 ntBASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Dupd1-202ENSMUST00000224735 548 ntBASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sh3tc2Q80VA5 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms