Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 Grk6-207ENSMUST00000225925 2769 ntBASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 Gm18049-201ENSMUST00000208909 581 ntBASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf38bQ80SY5 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf38bQ80SY5 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Efs-202ENSMUST00000227037 2540 ntBASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Gm44344-201ENSMUST00000200287 129 ntBASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf38bQ80SY5 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Gm37437-201ENSMUST00000194451 1937 ntBASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms