Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scn4bQ7M729 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn4bQ7M729 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.06□□□□□ -0.16
Scn4bQ7M729 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Gm25911-201ENSMUST00000157621 56 ntBASIC14.06□□□□□ -0.16
Scn4bQ7M729 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.06□□□□□ -0.16
Scn4bQ7M729 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn4bQ7M729 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scn4bQ7M729 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn4bQ7M729 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn4bQ7M729 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn4bQ7M729 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.05□□□□□ -0.16
Scn4bQ7M729 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn4bQ7M729 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn4bQ7M729 Gm11543-201ENSMUST00000120758 370 ntBASIC14.05□□□□□ -0.16
Scn4bQ7M729 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.05□□□□□ -0.16
Scn4bQ7M729 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn4bQ7M729 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.05□□□□□ -0.16
Scn4bQ7M729 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.05□□□□□ -0.16
Scn4bQ7M729 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn4bQ7M729 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn4bQ7M729 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn4bQ7M729 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn4bQ7M729 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn4bQ7M729 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn4bQ7M729 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Scn4bQ7M729 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn4bQ7M729 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Scn4bQ7M729 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn4bQ7M729 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn4bQ7M729 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Scn4bQ7M729 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.05□□□□□ -0.16
Scn4bQ7M729 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn4bQ7M729 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn4bQ7M729 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn4bQ7M729 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.04□□□□□ -0.16
Scn4bQ7M729 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn4bQ7M729 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn4bQ7M729 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn4bQ7M729 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn4bQ7M729 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Scn4bQ7M729 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn4bQ7M729 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.04□□□□□ -0.16
Scn4bQ7M729 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Scn4bQ7M729 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn4bQ7M729 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.04□□□□□ -0.16
Scn4bQ7M729 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.04□□□□□ -0.16
Scn4bQ7M729 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.04□□□□□ -0.16
Scn4bQ7M729 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn4bQ7M729 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn4bQ7M729 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn4bQ7M729 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn4bQ7M729 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.04□□□□□ -0.16
Scn4bQ7M729 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.04□□□□□ -0.16
Scn4bQ7M729 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn4bQ7M729 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn4bQ7M729 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.04□□□□□ -0.16
Scn4bQ7M729 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Scn4bQ7M729 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn4bQ7M729 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn4bQ7M729 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Scn4bQ7M729 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn4bQ7M729 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn4bQ7M729 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn4bQ7M729 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn4bQ7M729 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn4bQ7M729 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn4bQ7M729 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Scn4bQ7M729 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.03□□□□□ -0.16
Scn4bQ7M729 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn4bQ7M729 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.03□□□□□ -0.16
Scn4bQ7M729 Gm4995-201ENSMUST00000117247 432 ntBASIC14.03□□□□□ -0.16
Scn4bQ7M729 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.03□□□□□ -0.16
Scn4bQ7M729 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.03□□□□□ -0.16
Scn4bQ7M729 Gm45612-201ENSMUST00000211320 160 ntBASIC14.03□□□□□ -0.16
Scn4bQ7M729 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn4bQ7M729 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms