Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nudcd1Q6PIP5 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nudcd1Q6PIP5 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nudcd1Q6PIP5 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nudcd1Q6PIP5 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nudcd1Q6PIP5 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nudcd1Q6PIP5 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nudcd1Q6PIP5 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Nudcd1Q6PIP5 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nudcd1Q6PIP5 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nudcd1Q6PIP5 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.56□□□□□ -0.08
Nudcd1Q6PIP5 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nudcd1Q6PIP5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Gm6222-201ENSMUST00000120787 396 ntBASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Gm7775-201ENSMUST00000218871 853 ntBASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd1Q6PIP5 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Nudcd1Q6PIP5 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd1Q6PIP5 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms