Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.84■□□□□ 0.29
Smarcc2Q6PDG5 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.84■□□□□ 0.29
Smarcc2Q6PDG5 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.84■□□□□ 0.29
Smarcc2Q6PDG5 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smarcc2Q6PDG5 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Smarcc2Q6PDG5 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smarcc2Q6PDG5 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smarcc2Q6PDG5 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smarcc2Q6PDG5 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smarcc2Q6PDG5 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smarcc2Q6PDG5 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smarcc2Q6PDG5 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.83■□□□□ 0.28
Smarcc2Q6PDG5 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc2Q6PDG5 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.83■□□□□ 0.28
Smarcc2Q6PDG5 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.83■□□□□ 0.28
Smarcc2Q6PDG5 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc2Q6PDG5 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc2Q6PDG5 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc2Q6PDG5 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.83■□□□□ 0.28
Smarcc2Q6PDG5 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc2Q6PDG5 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.83■□□□□ 0.28
Smarcc2Q6PDG5 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc2Q6PDG5 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc2Q6PDG5 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc2Q6PDG5 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc2Q6PDG5 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc2Q6PDG5 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc2Q6PDG5 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc2Q6PDG5 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc2Q6PDG5 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc2Q6PDG5 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smarcc2Q6PDG5 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Smarcc2Q6PDG5 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc2Q6PDG5 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc2Q6PDG5 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Smarcc2Q6PDG5 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc2Q6PDG5 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Smarcc2Q6PDG5 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc2Q6PDG5 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc2Q6PDG5 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.82■□□□□ 0.28
Smarcc2Q6PDG5 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc2Q6PDG5 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc2Q6PDG5 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc2Q6PDG5 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.82■□□□□ 0.28
Smarcc2Q6PDG5 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc2Q6PDG5 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.82■□□□□ 0.28
Smarcc2Q6PDG5 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc2Q6PDG5 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Smarcc2Q6PDG5 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.82■□□□□ 0.28
Smarcc2Q6PDG5 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Smarcc2Q6PDG5 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc2Q6PDG5 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smarcc2Q6PDG5 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc2Q6PDG5 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc2Q6PDG5 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc2Q6PDG5 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc2Q6PDG5 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc2Q6PDG5 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc2Q6PDG5 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc2Q6PDG5 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smarcc2Q6PDG5 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc2Q6PDG5 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc2Q6PDG5 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc2Q6PDG5 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.81■□□□□ 0.28
Smarcc2Q6PDG5 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.81■□□□□ 0.28
Smarcc2Q6PDG5 Gm27920-201ENSMUST00000183953 96 ntBASIC16.81■□□□□ 0.28
Smarcc2Q6PDG5 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Smarcc2Q6PDG5 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.81■□□□□ 0.28
Smarcc2Q6PDG5 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smarcc2Q6PDG5 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc2Q6PDG5 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Smarcc2Q6PDG5 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smarcc2Q6PDG5 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Gm18737-201ENSMUST00000173594 937 ntBASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smarcc2Q6PDG5 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms