Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox17Q61473 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox17Q61473 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox17Q61473 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox17Q61473 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.54□□□□□ -0.24
Sox17Q61473 Gm5682-201ENSMUST00000173402 505 ntBASIC13.54□□□□□ -0.24
Sox17Q61473 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.54□□□□□ -0.24
Sox17Q61473 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.54□□□□□ -0.24
Sox17Q61473 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox17Q61473 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox17Q61473 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox17Q61473 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Sox17Q61473 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Sox17Q61473 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.54□□□□□ -0.24
Sox17Q61473 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox17Q61473 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.54□□□□□ -0.24
Sox17Q61473 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox17Q61473 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox17Q61473 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox17Q61473 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sox17Q61473 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sox17Q61473 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sox17Q61473 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.53□□□□□ -0.24
Sox17Q61473 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sox17Q61473 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.53□□□□□ -0.24
Sox17Q61473 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sox17Q61473 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Sox17Q61473 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Sox17Q61473 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.53□□□□□ -0.24
Sox17Q61473 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.53□□□□□ -0.24
Sox17Q61473 Gm7284-201ENSMUST00000131667 944 ntBASIC13.53□□□□□ -0.24
Sox17Q61473 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.53□□□□□ -0.24
Sox17Q61473 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.53□□□□□ -0.24
Sox17Q61473 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sox17Q61473 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sox17Q61473 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Sox17Q61473 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.53□□□□□ -0.24
Sox17Q61473 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sox17Q61473 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox17Q61473 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox17Q61473 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sox17Q61473 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.52□□□□□ -0.24
Sox17Q61473 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.52□□□□□ -0.24
Sox17Q61473 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.52□□□□□ -0.24
Sox17Q61473 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Sox17Q61473 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox17Q61473 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox17Q61473 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox17Q61473 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox17Q61473 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox17Q61473 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox17Q61473 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Sox17Q61473 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sox17Q61473 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sox17Q61473 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Sox17Q61473 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox17Q61473 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox17Q61473 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.52□□□□□ -0.25
Sox17Q61473 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox17Q61473 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.52□□□□□ -0.25
Sox17Q61473 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox17Q61473 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox17Q61473 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.52□□□□□ -0.25
Sox17Q61473 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.52□□□□□ -0.25
Sox17Q61473 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox17Q61473 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox17Q61473 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox17Q61473 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox17Q61473 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.52□□□□□ -0.25
Sox17Q61473 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox17Q61473 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox17Q61473 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox17Q61473 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox17Q61473 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox17Q61473 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox17Q61473 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms