Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ripk1Q60855 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.62□□□□□ -0.23
Ripk1Q60855 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Ripk1Q60855 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ripk1Q60855 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ripk1Q60855 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ripk1Q60855 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ripk1Q60855 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.62□□□□□ -0.23
Ripk1Q60855 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ripk1Q60855 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.62□□□□□ -0.23
Ripk1Q60855 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ripk1Q60855 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ripk1Q60855 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ripk1Q60855 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ripk1Q60855 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ripk1Q60855 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ripk1Q60855 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ripk1Q60855 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ripk1Q60855 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ripk1Q60855 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ripk1Q60855 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ripk1Q60855 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ripk1Q60855 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ripk1Q60855 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.61□□□□□ -0.23
Ripk1Q60855 Gm14494-201ENSMUST00000118786 435 ntBASIC13.61□□□□□ -0.23
Ripk1Q60855 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ripk1Q60855 Gm9182-201ENSMUST00000217829 639 ntBASIC13.61□□□□□ -0.23
Ripk1Q60855 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.61□□□□□ -0.23
Ripk1Q60855 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ripk1Q60855 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ripk1Q60855 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.61□□□□□ -0.23
Ripk1Q60855 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ripk1Q60855 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ripk1Q60855 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ripk1Q60855 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ripk1Q60855 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ripk1Q60855 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ripk1Q60855 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ripk1Q60855 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ripk1Q60855 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ripk1Q60855 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.6□□□□□ -0.23
Ripk1Q60855 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.6□□□□□ -0.23
Ripk1Q60855 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ripk1Q60855 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ripk1Q60855 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ripk1Q60855 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ripk1Q60855 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ripk1Q60855 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ripk1Q60855 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ripk1Q60855 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ripk1Q60855 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.6□□□□□ -0.23
Ripk1Q60855 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ripk1Q60855 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Ripk1Q60855 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Ripk1Q60855 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Ripk1Q60855 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.6□□□□□ -0.23
Ripk1Q60855 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ripk1Q60855 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ripk1Q60855 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ripk1Q60855 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ripk1Q60855 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ripk1Q60855 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ripk1Q60855 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ripk1Q60855 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ripk1Q60855 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ripk1Q60855 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ripk1Q60855 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.6□□□□□ -0.23
Ripk1Q60855 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ripk1Q60855 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ripk1Q60855 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ripk1Q60855 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.59□□□□□ -0.23
Ripk1Q60855 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ripk1Q60855 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ripk1Q60855 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ripk1Q60855 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ripk1Q60855 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ripk1Q60855 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ripk1Q60855 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ripk1Q60855 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ripk1Q60855 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ripk1Q60855 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Ripk1Q60855 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ripk1Q60855 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ripk1Q60855 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ripk1Q60855 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.59□□□□□ -0.23
Ripk1Q60855 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.59□□□□□ -0.23
Ripk1Q60855 Gm15483-201ENSMUST00000120338 456 ntBASIC13.59□□□□□ -0.23
Ripk1Q60855 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ripk1Q60855 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.59□□□□□ -0.23
Ripk1Q60855 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.59□□□□□ -0.23
Ripk1Q60855 Gm27525-201ENSMUST00000184465 107 ntBASIC13.59□□□□□ -0.23
Ripk1Q60855 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.59□□□□□ -0.23
Ripk1Q60855 Gm45098-201ENSMUST00000207179 657 ntBASIC13.59□□□□□ -0.23
Ripk1Q60855 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.59□□□□□ -0.23
Ripk1Q60855 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.59□□□□□ -0.23
Ripk1Q60855 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ripk1Q60855 Gm10175-201ENSMUST00000086013 645 ntBASIC13.59□□□□□ -0.23
Ripk1Q60855 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ripk1Q60855 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ripk1Q60855 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms