Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Satb1Q60611 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Satb1Q60611 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Satb1Q60611 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Satb1Q60611 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Satb1Q60611 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.95□□□□□ -0.02
Satb1Q60611 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.95□□□□□ -0.02
Satb1Q60611 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Satb1Q60611 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Satb1Q60611 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.95□□□□□ -0.02
Satb1Q60611 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.95□□□□□ -0.02
Satb1Q60611 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.95□□□□□ -0.02
Satb1Q60611 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.95□□□□□ -0.02
Satb1Q60611 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Satb1Q60611 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Satb1Q60611 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Satb1Q60611 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
Satb1Q60611 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Satb1Q60611 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Satb1Q60611 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Satb1Q60611 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.94□□□□□ -0.02
Satb1Q60611 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Satb1Q60611 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Satb1Q60611 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.94□□□□□ -0.02
Satb1Q60611 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.94□□□□□ -0.02
Satb1Q60611 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Satb1Q60611 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Satb1Q60611 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.94□□□□□ -0.02
Satb1Q60611 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 Gm20445-201ENSMUST00000061905 565 ntBASIC14.94□□□□□ -0.02
Satb1Q60611 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.94□□□□□ -0.02
Satb1Q60611 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Satb1Q60611 App-207ENSMUST00000227737 2827 ntBASIC14.93□□□□□ -0.02
Satb1Q60611 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.93□□□□□ -0.02
Satb1Q60611 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Satb1Q60611 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Satb1Q60611 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.93□□□□□ -0.02
Satb1Q60611 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Satb1Q60611 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Satb1Q60611 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Satb1Q60611 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Satb1Q60611 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Satb1Q60611 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Satb1Q60611 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Satb1Q60611 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Satb1Q60611 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Satb1Q60611 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Satb1Q60611 Gm15806-201ENSMUST00000120696 955 ntBASIC14.93□□□□□ -0.02
Satb1Q60611 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.93□□□□□ -0.02
Satb1Q60611 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.93□□□□□ -0.02
Satb1Q60611 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Satb1Q60611 Gm37917-201ENSMUST00000194711 392 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms