Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps54Q5SPW0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps54Q5SPW0 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vps54Q5SPW0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps54Q5SPW0 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vps54Q5SPW0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps54Q5SPW0 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps54Q5SPW0 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Vps54Q5SPW0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps54Q5SPW0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps54Q5SPW0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps54Q5SPW0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps54Q5SPW0 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps54Q5SPW0 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.3■□□□□ 0.36
Vps54Q5SPW0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps54Q5SPW0 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.3■□□□□ 0.36
Vps54Q5SPW0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps54Q5SPW0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps54Q5SPW0 Mir125a-201ENSMUST00000083545 68 ntBASIC17.3■□□□□ 0.36
Vps54Q5SPW0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps54Q5SPW0 BC001981-202ENSMUST00000191393 1545 ntBASIC17.3■□□□□ 0.36
Vps54Q5SPW0 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps54Q5SPW0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps54Q5SPW0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps54Q5SPW0 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps54Q5SPW0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps54Q5SPW0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Vps54Q5SPW0 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.3■□□□□ 0.36
Vps54Q5SPW0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vps54Q5SPW0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vps54Q5SPW0 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Gm27306-201ENSMUST00000183970 107 ntBASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Mir7023-201ENSMUST00000185093 64 ntBASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Gm44344-201ENSMUST00000200287 129 ntBASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vps54Q5SPW0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Gm9063-201ENSMUST00000223299 582 ntBASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vps54Q5SPW0 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps54Q5SPW0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps54Q5SPW0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Vps54Q5SPW0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps54Q5SPW0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps54Q5SPW0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps54Q5SPW0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Vps54Q5SPW0 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.27■□□□□ 0.36
Vps54Q5SPW0 Gm27680-201ENSMUST00000184192 160 ntBASIC17.27■□□□□ 0.36
Vps54Q5SPW0 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.27■□□□□ 0.36
Vps54Q5SPW0 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vps54Q5SPW0 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vps54Q5SPW0 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms