Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Gm6433-201ENSMUST00000118634 875 ntBASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Gm9013-201ENSMUST00000132939 882 ntBASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-3Q5R1C3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Gm8668-201ENSMUST00000120559 1447 ntBASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Gm25925-201ENSMUST00000158314 306 ntBASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Mir6404-201ENSMUST00000183699 94 ntBASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Gm43799-201ENSMUST00000201845 579 ntBASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-3Q5R1C3 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Gm10013-201ENSMUST00000106074 672 ntBASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Gm6257-201ENSMUST00000163864 910 ntBASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-3Q5R1C3 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms