Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm4Q4VBF2 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.55■□□□□ 0.08
R3hdm4Q4VBF2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm4Q4VBF2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm4Q4VBF2 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm4Q4VBF2 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm4Q4VBF2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.55■□□□□ 0.08
R3hdm4Q4VBF2 Mir6956-201ENSMUST00000183598 62 ntBASIC15.55■□□□□ 0.08
R3hdm4Q4VBF2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm4Q4VBF2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.55■□□□□ 0.08
R3hdm4Q4VBF2 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.55■□□□□ 0.08
R3hdm4Q4VBF2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm4Q4VBF2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm4Q4VBF2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.55■□□□□ 0.08
R3hdm4Q4VBF2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
R3hdm4Q4VBF2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm4Q4VBF2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Gm8410-201ENSMUST00000117225 605 ntBASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Gm27622-201ENSMUST00000183779 60 ntBASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
R3hdm4Q4VBF2 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
R3hdm4Q4VBF2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
R3hdm4Q4VBF2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
R3hdm4Q4VBF2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
R3hdm4Q4VBF2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
R3hdm4Q4VBF2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
R3hdm4Q4VBF2 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
R3hdm4Q4VBF2 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
R3hdm4Q4VBF2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
R3hdm4Q4VBF2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
R3hdm4Q4VBF2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
R3hdm4Q4VBF2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
R3hdm4Q4VBF2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.52■□□□□ 0.08
R3hdm4Q4VBF2 Gm13223-201ENSMUST00000118609 747 ntBASIC15.52■□□□□ 0.08
R3hdm4Q4VBF2 Gm12428-201ENSMUST00000119844 727 ntBASIC15.52■□□□□ 0.08
R3hdm4Q4VBF2 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
R3hdm4Q4VBF2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
R3hdm4Q4VBF2 Gm45453-201ENSMUST00000211758 853 ntBASIC15.52■□□□□ 0.08
R3hdm4Q4VBF2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
R3hdm4Q4VBF2 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
R3hdm4Q4VBF2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
R3hdm4Q4VBF2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
R3hdm4Q4VBF2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
R3hdm4Q4VBF2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
R3hdm4Q4VBF2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
R3hdm4Q4VBF2 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
R3hdm4Q4VBF2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
R3hdm4Q4VBF2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms