Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Syne3Q4FZC9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Syne3Q4FZC9 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.33■□□□□ 0.04
Syne3Q4FZC9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Syne3Q4FZC9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Syne3Q4FZC9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Syne3Q4FZC9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Syne3Q4FZC9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Syne3Q4FZC9 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Syne3Q4FZC9 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Syne3Q4FZC9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
Syne3Q4FZC9 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Syne3Q4FZC9 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Gm27494-201ENSMUST00000184735 189 ntBASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Syne3Q4FZC9 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Gm11543-201ENSMUST00000120758 370 ntBASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Rprl2-201ENSMUST00000157150 290 ntBASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Gm45612-201ENSMUST00000211320 160 ntBASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Syne3Q4FZC9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Syne3Q4FZC9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.3■□□□□ 0.04
Syne3Q4FZC9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Syne3Q4FZC9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syne3Q4FZC9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Syne3Q4FZC9 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syne3Q4FZC9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.3■□□□□ 0.04
Syne3Q4FZC9 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Syne3Q4FZC9 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.3■□□□□ 0.04
Syne3Q4FZC9 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.3■□□□□ 0.04
Syne3Q4FZC9 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syne3Q4FZC9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Syne3Q4FZC9 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.3■□□□□ 0.04
Syne3Q4FZC9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Syne3Q4FZC9 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syne3Q4FZC9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Syne3Q4FZC9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Syne3Q4FZC9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Syne3Q4FZC9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms