Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf38aQ4FK66 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf38aQ4FK66 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38aQ4FK66 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38aQ4FK66 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38aQ4FK66 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38aQ4FK66 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38aQ4FK66 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Prpf38aQ4FK66 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38aQ4FK66 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38aQ4FK66 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Prpf38aQ4FK66 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
Prpf38aQ4FK66 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Prpf38aQ4FK66 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.81■□□□□ 0.28
Prpf38aQ4FK66 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.81■□□□□ 0.28
Prpf38aQ4FK66 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Prpf38aQ4FK66 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38aQ4FK66 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf38aQ4FK66 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Prpf38aQ4FK66 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.81■□□□□ 0.28
Prpf38aQ4FK66 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Prpf38aQ4FK66 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Gm33320-201ENSMUST00000192232 530 ntBASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Gm20445-201ENSMUST00000061905 565 ntBASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf38aQ4FK66 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Prpf38aQ4FK66 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38aQ4FK66 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.79■□□□□ 0.28
Prpf38aQ4FK66 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38aQ4FK66 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Prpf38aQ4FK66 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.79■□□□□ 0.28
Prpf38aQ4FK66 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38aQ4FK66 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38aQ4FK66 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38aQ4FK66 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Prpf38aQ4FK66 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38aQ4FK66 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38aQ4FK66 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Prpf38aQ4FK66 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Prpf38aQ4FK66 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Prpf38aQ4FK66 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms