Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Gm22190-201ENSMUST00000103827 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm22191-201ENSMUST00000103831 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm24721-201ENSMUST00000103849 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm28018-201ENSMUST00000103869 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm26399-201ENSMUST00000103937 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm25349-201ENSMUST00000177728 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm23616-201ENSMUST00000177797 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm25871-201ENSMUST00000177816 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm24752-201ENSMUST00000178240 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm24496-201ENSMUST00000178287 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm25649-201ENSMUST00000178476 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm25548-201ENSMUST00000178681 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm23147-201ENSMUST00000178841 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm26095-201ENSMUST00000179270 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm22171-201ENSMUST00000179283 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm23936-201ENSMUST00000179354 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm22619-201ENSMUST00000179516 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm25255-201ENSMUST00000179579 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm24755-201ENSMUST00000179691 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm26506-201ENSMUST00000179692 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm25086-201ENSMUST00000179931 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm23243-201ENSMUST00000180047 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm24659-201ENSMUST00000180212 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm24169-201ENSMUST00000180244 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm23689-201ENSMUST00000180354 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm27359-201ENSMUST00000184153 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm27785-201ENSMUST00000184268 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm27466-201ENSMUST00000184396 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm27703-201ENSMUST00000184836 110 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Limch1Q3UH68 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm7774-201ENSMUST00000200064 533 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Limch1Q3UH68 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Limch1Q3UH68 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Limch1Q3UH68 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Limch1Q3UH68 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Limch1Q3UH68 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Limch1Q3UH68 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Limch1Q3UH68 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Limch1Q3UH68 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Limch1Q3UH68 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Limch1Q3UH68 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.99■□□□□ 0.31
Limch1Q3UH68 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Limch1Q3UH68 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Limch1Q3UH68 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Limch1Q3UH68 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Limch1Q3UH68 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Limch1Q3UH68 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Limch1Q3UH68 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Limch1Q3UH68 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Limch1Q3UH68 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.99■□□□□ 0.31
Limch1Q3UH68 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Limch1Q3UH68 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Limch1Q3UH68 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Limch1Q3UH68 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Limch1Q3UH68 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.98■□□□□ 0.31
Limch1Q3UH68 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Limch1Q3UH68 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.98■□□□□ 0.31
Limch1Q3UH68 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Limch1Q3UH68 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Limch1Q3UH68 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Limch1Q3UH68 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Limch1Q3UH68 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Limch1Q3UH68 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Limch1Q3UH68 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Limch1Q3UH68 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Limch1Q3UH68 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Limch1Q3UH68 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.98■□□□□ 0.31
Limch1Q3UH68 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Limch1Q3UH68 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Limch1Q3UH68 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Limch1Q3UH68 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.98■□□□□ 0.31
Limch1Q3UH68 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Limch1Q3UH68 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Limch1Q3UH68 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Limch1Q3UH68 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.98■□□□□ 0.31
Limch1Q3UH68 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Limch1Q3UH68 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Limch1Q3UH68 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.98■□□□□ 0.31
Limch1Q3UH68 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Limch1Q3UH68 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.97■□□□□ 0.31
Limch1Q3UH68 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Limch1Q3UH68 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Limch1Q3UH68 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.97■□□□□ 0.31
Limch1Q3UH68 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.97■□□□□ 0.31
Limch1Q3UH68 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Limch1Q3UH68 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Limch1Q3UH68 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Limch1Q3UH68 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Limch1Q3UH68 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Limch1Q3UH68 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Limch1Q3UH68 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Limch1Q3UH68 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Limch1Q3UH68 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Limch1Q3UH68 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Limch1Q3UH68 Gm10253-201ENSMUST00000194270 940 ntBASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms