Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.89□□□□□ -0.51
Trim63Q38HM4 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC11.89□□□□□ -0.51
Trim63Q38HM4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Gm42545-201ENSMUST00000202755 922 ntBASIC11.89□□□□□ -0.51
Trim63Q38HM4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC11.89□□□□□ -0.51
Trim63Q38HM4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Gm10493-201ENSMUST00000097270 612 ntBASIC11.89□□□□□ -0.51
Trim63Q38HM4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Gm15442-201ENSMUST00000117905 1527 ntBASIC11.89□□□□□ -0.51
Trim63Q38HM4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.89□□□□□ -0.51
Trim63Q38HM4 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim63Q38HM4 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim63Q38HM4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Gm18421-201ENSMUST00000204122 625 ntBASIC11.88□□□□□ -0.51
Trim63Q38HM4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim63Q38HM4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim63Q38HM4 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim63Q38HM4 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim63Q38HM4 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim63Q38HM4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.87□□□□□ -0.51
Trim63Q38HM4 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.87□□□□□ -0.51
Trim63Q38HM4 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim63Q38HM4 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim63Q38HM4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim63Q38HM4 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.87□□□□□ -0.51
Trim63Q38HM4 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim63Q38HM4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim63Q38HM4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim63Q38HM4 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim63Q38HM4 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim63Q38HM4 Gm6211-202ENSMUST00000167849 925 ntBASIC11.87□□□□□ -0.51
Trim63Q38HM4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC11.87□□□□□ -0.51
Trim63Q38HM4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim63Q38HM4 Gm18025-201ENSMUST00000221733 862 ntBASIC11.87□□□□□ -0.51
Trim63Q38HM4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim63Q38HM4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim63Q38HM4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim63Q38HM4 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.87□□□□□ -0.51
Trim63Q38HM4 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim63Q38HM4 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim63Q38HM4 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim63Q38HM4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms