Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 AC122459.1-201ENSMUST00000228373 885 ntBASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chrna5Q2MKA5 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chrna5Q2MKA5 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Chrna5Q2MKA5 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chrna5Q2MKA5 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chrna5Q2MKA5 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Chrna5Q2MKA5 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chrna5Q2MKA5 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.03■□□□□ 0.32
Chrna5Q2MKA5 Gm27731-201ENSMUST00000185192 107 ntBASIC17.03■□□□□ 0.32
Chrna5Q2MKA5 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chrna5Q2MKA5 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chrna5Q2MKA5 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chrna5Q2MKA5 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chrna5Q2MKA5 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC17.03■□□□□ 0.32
Chrna5Q2MKA5 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Chrna5Q2MKA5 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chrna5Q2MKA5 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chrna5Q2MKA5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chrna5Q2MKA5 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chrna5Q2MKA5 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Chrna5Q2MKA5 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Chrna5Q2MKA5 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chrna5Q2MKA5 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Mir1247-201ENSMUST00000116706 82 ntBASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Gm12928-201ENSMUST00000117115 573 ntBASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Snora78-201ENSMUST00000158630 128 ntBASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Gm17420-201ENSMUST00000164753 153 ntBASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Gm37714-201ENSMUST00000194742 342 ntBASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Gm7287-201ENSMUST00000205267 602 ntBASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Gm19078-201ENSMUST00000206311 727 ntBASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Gm44974-201ENSMUST00000206387 1279 ntBASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Olfr582-201ENSMUST00000098212 960 ntBASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Chrna5Q2MKA5 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chrna5Q2MKA5 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Chrna5Q2MKA5 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17.02■□□□□ 0.31
Chrna5Q2MKA5 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chrna5Q2MKA5 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chrna5Q2MKA5 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC17.02■□□□□ 0.31
Chrna5Q2MKA5 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chrna5Q2MKA5 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna5Q2MKA5 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna5Q2MKA5 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna5Q2MKA5 Gm11661-201ENSMUST00000121761 1327 ntBASIC17.01■□□□□ 0.31
Chrna5Q2MKA5 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna5Q2MKA5 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna5Q2MKA5 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna5Q2MKA5 Gm15198-201ENSMUST00000117283 177 ntBASIC17.01■□□□□ 0.31
Chrna5Q2MKA5 Gm13689-201ENSMUST00000119360 685 ntBASIC17.01■□□□□ 0.31
Chrna5Q2MKA5 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Chrna5Q2MKA5 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Chrna5Q2MKA5 AC159896.2-201ENSMUST00000214753 269 ntBASIC17.01■□□□□ 0.31
Chrna5Q2MKA5 AC154319.1-201ENSMUST00000216330 312 ntBASIC17.01■□□□□ 0.31
Chrna5Q2MKA5 AL589735.1-201ENSMUST00000224353 270 ntBASIC17.01■□□□□ 0.31
Chrna5Q2MKA5 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna5Q2MKA5 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Chrna5Q2MKA5 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna5Q2MKA5 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Chrna5Q2MKA5 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna5Q2MKA5 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna5Q2MKA5 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms