Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Chd8Q09XV5 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chd8Q09XV5 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chd8Q09XV5 Gm25545-201ENSMUST00000122673 323 ntBASIC12.77□□□□□ -0.36
Chd8Q09XV5 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.77□□□□□ -0.36
Chd8Q09XV5 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chd8Q09XV5 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chd8Q09XV5 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chd8Q09XV5 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Chd8Q09XV5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.77□□□□□ -0.36
Chd8Q09XV5 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chd8Q09XV5 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Chd8Q09XV5 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Chd8Q09XV5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chd8Q09XV5 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd8Q09XV5 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd8Q09XV5 Gm13408-201ENSMUST00000119822 798 ntBASIC12.77□□□□□ -0.37
Chd8Q09XV5 Gm13935-201ENSMUST00000121859 798 ntBASIC12.77□□□□□ -0.37
Chd8Q09XV5 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Chd8Q09XV5 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.77□□□□□ -0.37
Chd8Q09XV5 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.77□□□□□ -0.37
Chd8Q09XV5 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd8Q09XV5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd8Q09XV5 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.77□□□□□ -0.37
Chd8Q09XV5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd8Q09XV5 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd8Q09XV5 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.77□□□□□ -0.37
Chd8Q09XV5 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd8Q09XV5 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd8Q09XV5 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd8Q09XV5 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Chd8Q09XV5 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
Chd8Q09XV5 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd8Q09XV5 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Chd8Q09XV5 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Gm19459-201ENSMUST00000176240 835 ntBASIC12.76□□□□□ -0.37
Chd8Q09XV5 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.76□□□□□ -0.37
Chd8Q09XV5 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.76□□□□□ -0.37
Chd8Q09XV5 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.76□□□□□ -0.37
Chd8Q09XV5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.76□□□□□ -0.37
Chd8Q09XV5 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.76□□□□□ -0.37
Chd8Q09XV5 Gm13570-201ENSMUST00000140763 309 ntBASIC12.76□□□□□ -0.37
Chd8Q09XV5 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.76□□□□□ -0.37
Chd8Q09XV5 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.76□□□□□ -0.37
Chd8Q09XV5 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.76□□□□□ -0.37
Chd8Q09XV5 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Chd8Q09XV5 Gm3283-201ENSMUST00000199319 1350 ntBASIC12.75□□□□□ -0.37
Chd8Q09XV5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.75□□□□□ -0.37
Chd8Q09XV5 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.75□□□□□ -0.37
Chd8Q09XV5 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms