Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hspg2Q05793 Gm15429-201ENSMUST00000151268 798 ntBASIC10.41□□□□□ -0.74
Hspg2Q05793 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.41□□□□□ -0.74
Hspg2Q05793 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC10.41□□□□□ -0.74
Hspg2Q05793 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hspg2Q05793 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hspg2Q05793 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hspg2Q05793 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hspg2Q05793 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Hspg2Q05793 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hspg2Q05793 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hspg2Q05793 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC10.4□□□□□ -0.74
Hspg2Q05793 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Hspg2Q05793 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC10.4□□□□□ -0.74
Hspg2Q05793 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hspg2Q05793 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hspg2Q05793 Gm22331-201ENSMUST00000158066 136 ntBASIC10.4□□□□□ -0.74
Hspg2Q05793 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hspg2Q05793 Snora73a-201ENSMUST00000082453 205 ntBASIC10.4□□□□□ -0.74
Hspg2Q05793 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Hspg2Q05793 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hspg2Q05793 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Hspg2Q05793 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hspg2Q05793 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hspg2Q05793 Gm9768-201ENSMUST00000206007 2861 ntBASIC10.4□□□□□ -0.74
Hspg2Q05793 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hspg2Q05793 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hspg2Q05793 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hspg2Q05793 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hspg2Q05793 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Hspg2Q05793 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC10.4□□□□□ -0.74
Hspg2Q05793 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.4□□□□□ -0.74
Hspg2Q05793 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.4□□□□□ -0.74
Hspg2Q05793 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hspg2Q05793 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hspg2Q05793 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hspg2Q05793 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Hspg2Q05793 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hspg2Q05793 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Hspg2Q05793 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hspg2Q05793 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hspg2Q05793 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Hspg2Q05793 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC10.4□□□□□ -0.75
Hspg2Q05793 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC10.4□□□□□ -0.75
Hspg2Q05793 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Hspg2Q05793 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hspg2Q05793 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hspg2Q05793 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hspg2Q05793 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hspg2Q05793 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hspg2Q05793 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hspg2Q05793 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hspg2Q05793 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
Hspg2Q05793 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hspg2Q05793 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC10.39□□□□□ -0.75
Hspg2Q05793 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hspg2Q05793 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hspg2Q05793 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hspg2Q05793 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.39□□□□□ -0.75
Hspg2Q05793 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.39□□□□□ -0.75
Hspg2Q05793 Gm29705-201ENSMUST00000212598 474 ntBASIC10.39□□□□□ -0.75
Hspg2Q05793 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Hspg2Q05793 AC139350.3-201ENSMUST00000226151 420 ntBASIC10.39□□□□□ -0.75
Hspg2Q05793 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.39□□□□□ -0.75
Hspg2Q05793 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Hspg2Q05793 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Hspg2Q05793 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hspg2Q05793 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC10.39□□□□□ -0.75
Hspg2Q05793 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hspg2Q05793 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Hspg2Q05793 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hspg2Q05793 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hspg2Q05793 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hspg2Q05793 Gm22323-201ENSMUST00000103832 109 ntBASIC10.39□□□□□ -0.75
Hspg2Q05793 Gm13297-201ENSMUST00000120205 934 ntBASIC10.39□□□□□ -0.75
Hspg2Q05793 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Hspg2Q05793 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hspg2Q05793 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.39□□□□□ -0.75
Hspg2Q05793 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hspg2Q05793 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Hspg2Q05793 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hspg2Q05793 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hspg2Q05793 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hspg2Q05793 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hspg2Q05793 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hspg2Q05793 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.38□□□□□ -0.75
Hspg2Q05793 Gm43758-201ENSMUST00000199500 367 ntBASIC10.38□□□□□ -0.75
Hspg2Q05793 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hspg2Q05793 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hspg2Q05793 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hspg2Q05793 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hspg2Q05793 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Hspg2Q05793 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC10.38□□□□□ -0.75
Hspg2Q05793 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hspg2Q05793 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hspg2Q05793 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hspg2Q05793 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hspg2Q05793 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.38□□□□□ -0.75
Hspg2Q05793 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hspg2Q05793 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms