Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb1P70662 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ldb1P70662 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb1P70662 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb1P70662 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb1P70662 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb1P70662 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb1P70662 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb1P70662 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb1P70662 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ldb1P70662 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb1P70662 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb1P70662 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ldb1P70662 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ldb1P70662 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb1P70662 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb1P70662 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.38□□□□□ -0.11
Ldb1P70662 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb1P70662 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.38□□□□□ -0.11
Ldb1P70662 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ldb1P70662 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb1P70662 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb1P70662 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb1P70662 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb1P70662 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.38□□□□□ -0.11
Ldb1P70662 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb1P70662 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ldb1P70662 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb1P70662 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb1P70662 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.38□□□□□ -0.11
Ldb1P70662 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.38□□□□□ -0.11
Ldb1P70662 Gm11745-201ENSMUST00000121669 448 ntBASIC14.38□□□□□ -0.11
Ldb1P70662 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb1P70662 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.38□□□□□ -0.11
Ldb1P70662 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.38□□□□□ -0.11
Ldb1P70662 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.38□□□□□ -0.11
Ldb1P70662 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb1P70662 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.38□□□□□ -0.11
Ldb1P70662 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb1P70662 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb1P70662 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.38□□□□□ -0.11
Ldb1P70662 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb1P70662 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb1P70662 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.38□□□□□ -0.11
Ldb1P70662 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb1P70662 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb1P70662 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.38□□□□□ -0.11
Ldb1P70662 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb1P70662 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ldb1P70662 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb1P70662 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.37□□□□□ -0.11
Ldb1P70662 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb1P70662 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ldb1P70662 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb1P70662 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb1P70662 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb1P70662 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ldb1P70662 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb1P70662 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb1P70662 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.37□□□□□ -0.11
Ldb1P70662 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb1P70662 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb1P70662 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.37□□□□□ -0.11
Ldb1P70662 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.37□□□□□ -0.11
Ldb1P70662 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb1P70662 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.37□□□□□ -0.11
Ldb1P70662 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.37□□□□□ -0.11
Ldb1P70662 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.37□□□□□ -0.11
Ldb1P70662 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb1P70662 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb1P70662 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
Ldb1P70662 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb1P70662 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ldb1P70662 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb1P70662 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb1P70662 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb1P70662 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb1P70662 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.37□□□□□ -0.11
Ldb1P70662 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ldb1P70662 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb1P70662 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ldb1P70662 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb1P70662 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ldb1P70662 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ldb1P70662 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb1P70662 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.36□□□□□ -0.11
Ldb1P70662 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.36□□□□□ -0.11
Ldb1P70662 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb1P70662 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.36□□□□□ -0.11
Ldb1P70662 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ldb1P70662 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.36□□□□□ -0.11
Ldb1P70662 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb1P70662 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb1P70662 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.36□□□□□ -0.11
Ldb1P70662 Gm9182-201ENSMUST00000217829 639 ntBASIC14.36□□□□□ -0.11
Ldb1P70662 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb1P70662 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ldb1P70662 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb1P70662 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Ldb1P70662 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms