Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Gm7506-201ENSMUST00000207758 815 ntBASIC14.26□□□□□ -0.13
Shox2P70390 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Shox2P70390 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Shox2P70390 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Shox2P70390 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shox2P70390 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.25□□□□□ -0.13
Shox2P70390 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shox2P70390 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shox2P70390 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shox2P70390 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shox2P70390 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Shox2P70390 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Shox2P70390 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.25□□□□□ -0.13
Shox2P70390 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.25□□□□□ -0.13
Shox2P70390 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Shox2P70390 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shox2P70390 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shox2P70390 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shox2P70390 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shox2P70390 Gm15165-201ENSMUST00000118140 502 ntBASIC14.25□□□□□ -0.13
Shox2P70390 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Shox2P70390 Gm11950-201ENSMUST00000121615 838 ntBASIC14.25□□□□□ -0.13
Shox2P70390 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.25□□□□□ -0.13
Shox2P70390 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.25□□□□□ -0.13
Shox2P70390 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.25□□□□□ -0.13
Shox2P70390 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shox2P70390 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shox2P70390 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shox2P70390 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Shox2P70390 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Shox2P70390 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.25□□□□□ -0.13
Shox2P70390 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shox2P70390 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shox2P70390 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shox2P70390 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shox2P70390 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shox2P70390 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Shox2P70390 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Shox2P70390 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Shox2P70390 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Shox2P70390 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.24□□□□□ -0.13
Shox2P70390 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Gm2451-201ENSMUST00000199447 999 ntBASIC14.24□□□□□ -0.13
Shox2P70390 Gm10290-201ENSMUST00000200451 999 ntBASIC14.24□□□□□ -0.13
Shox2P70390 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Shox2P70390 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Shox2P70390 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Shox2P70390 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Shox2P70390 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shox2P70390 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shox2P70390 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shox2P70390 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms