Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim4P70271 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim4P70271 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Pdlim4P70271 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim4P70271 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim4P70271 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim4P70271 Gm6973-201ENSMUST00000117080 721 ntBASIC12.02□□□□□ -0.49
Pdlim4P70271 Gm13464-201ENSMUST00000119418 935 ntBASIC12.02□□□□□ -0.49
Pdlim4P70271 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim4P70271 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim4P70271 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim4P70271 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim4P70271 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim4P70271 Gm18057-201ENSMUST00000208220 503 ntBASIC12.02□□□□□ -0.49
Pdlim4P70271 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.02□□□□□ -0.49
Pdlim4P70271 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim4P70271 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim4P70271 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim4P70271 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim4P70271 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim4P70271 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim4P70271 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim4P70271 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim4P70271 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Pdlim4P70271 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
Pdlim4P70271 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.02□□□□□ -0.49
Pdlim4P70271 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Pdlim4P70271 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim4P70271 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pdlim4P70271 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Pdlim4P70271 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.01□□□□□ -0.49
Pdlim4P70271 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.01□□□□□ -0.49
Pdlim4P70271 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.01□□□□□ -0.49
Pdlim4P70271 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.01□□□□□ -0.49
Pdlim4P70271 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.01□□□□□ -0.49
Pdlim4P70271 Gm15483-201ENSMUST00000120338 456 ntBASIC12.01□□□□□ -0.49
Pdlim4P70271 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.01□□□□□ -0.49
Pdlim4P70271 Gm18737-201ENSMUST00000173594 937 ntBASIC12.01□□□□□ -0.49
Pdlim4P70271 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.01□□□□□ -0.49
Pdlim4P70271 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pdlim4P70271 Gm43575-201ENSMUST00000196420 516 ntBASIC12.01□□□□□ -0.49
Pdlim4P70271 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.01□□□□□ -0.49
Pdlim4P70271 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.01□□□□□ -0.49
Pdlim4P70271 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.01□□□□□ -0.49
Pdlim4P70271 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pdlim4P70271 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Pdlim4P70271 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.01□□□□□ -0.49
Pdlim4P70271 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pdlim4P70271 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pdlim4P70271 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12□□□□□ -0.49
Pdlim4P70271 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12□□□□□ -0.49
Pdlim4P70271 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12□□□□□ -0.49
Pdlim4P70271 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pdlim4P70271 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12□□□□□ -0.49
Pdlim4P70271 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pdlim4P70271 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms