Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx1P63006 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx1P63006 Mir125a-201ENSMUST00000083545 68 ntBASIC14.17□□□□□ -0.14
Lhx1P63006 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx1P63006 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx1P63006 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx1P63006 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx1P63006 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx1P63006 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx1P63006 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx1P63006 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx1P63006 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx1P63006 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Lhx1P63006 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.17□□□□□ -0.14
Lhx1P63006 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Lhx1P63006 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx1P63006 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lhx1P63006 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx1P63006 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx1P63006 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.16□□□□□ -0.14
Lhx1P63006 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx1P63006 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx1P63006 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx1P63006 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.16□□□□□ -0.14
Lhx1P63006 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx1P63006 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.16□□□□□ -0.14
Lhx1P63006 Gm27321-201ENSMUST00000185021 205 ntBASIC14.16□□□□□ -0.14
Lhx1P63006 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lhx1P63006 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lhx1P63006 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
Lhx1P63006 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Lhx1P63006 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx1P63006 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lhx1P63006 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx1P63006 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx1P63006 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx1P63006 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lhx1P63006 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx1P63006 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.16□□□□□ -0.14
Lhx1P63006 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx1P63006 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Lhx1P63006 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lhx1P63006 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lhx1P63006 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.15□□□□□ -0.14
Lhx1P63006 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.15□□□□□ -0.14
Lhx1P63006 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Lhx1P63006 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lhx1P63006 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lhx1P63006 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lhx1P63006 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Lhx1P63006 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lhx1P63006 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lhx1P63006 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lhx1P63006 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lhx1P63006 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lhx1P63006 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.15□□□□□ -0.14
Lhx1P63006 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.15□□□□□ -0.14
Lhx1P63006 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.15□□□□□ -0.14
Lhx1P63006 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.15□□□□□ -0.14
Lhx1P63006 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lhx1P63006 Gm46209-201ENSMUST00000217912 553 ntBASIC14.15□□□□□ -0.14
Lhx1P63006 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.15□□□□□ -0.14
Lhx1P63006 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.15□□□□□ -0.14
Lhx1P63006 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.15□□□□□ -0.14
Lhx1P63006 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lhx1P63006 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lhx1P63006 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.15□□□□□ -0.14
Lhx1P63006 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lhx1P63006 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lhx1P63006 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lhx1P63006 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Lhx1P63006 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lhx1P63006 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lhx1P63006 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Lhx1P63006 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lhx1P63006 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.14□□□□□ -0.15
Lhx1P63006 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.14□□□□□ -0.15
Lhx1P63006 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lhx1P63006 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lhx1P63006 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.14□□□□□ -0.15
Lhx1P63006 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lhx1P63006 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lhx1P63006 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.14□□□□□ -0.15
Lhx1P63006 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lhx1P63006 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lhx1P63006 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lhx1P63006 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.14□□□□□ -0.15
Lhx1P63006 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lhx1P63006 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lhx1P63006 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.14□□□□□ -0.15
Lhx1P63006 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Lhx1P63006 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lhx1P63006 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Lhx1P63006 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lhx1P63006 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.14□□□□□ -0.15
Lhx1P63006 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lhx1P63006 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lhx1P63006 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lhx1P63006 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lhx1P63006 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms