Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ybx1P62960 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ybx1P62960 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ybx1P62960 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ybx1P62960 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ybx1P62960 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ybx1P62960 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Ybx1P62960 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.75□□□□□ -0.05
Ybx1P62960 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.75□□□□□ -0.05
Ybx1P62960 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.75□□□□□ -0.05
Ybx1P62960 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.75□□□□□ -0.05
Ybx1P62960 Gm18624-201ENSMUST00000220966 658 ntBASIC14.75□□□□□ -0.05
Ybx1P62960 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ybx1P62960 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ybx1P62960 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ybx1P62960 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ybx1P62960 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ybx1P62960 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ybx1P62960 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ybx1P62960 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ybx1P62960 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
Ybx1P62960 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.75□□□□□ -0.05
Ybx1P62960 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ybx1P62960 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ybx1P62960 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ybx1P62960 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ybx1P62960 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ybx1P62960 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ybx1P62960 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ybx1P62960 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ybx1P62960 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ybx1P62960 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ybx1P62960 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ybx1P62960 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ybx1P62960 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ybx1P62960 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ybx1P62960 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.74□□□□□ -0.05
Ybx1P62960 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ybx1P62960 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ybx1P62960 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ybx1P62960 Gm11478-201ENSMUST00000117851 599 ntBASIC14.74□□□□□ -0.05
Ybx1P62960 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Ybx1P62960 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.74□□□□□ -0.05
Ybx1P62960 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.74□□□□□ -0.05
Ybx1P62960 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Ybx1P62960 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.74□□□□□ -0.05
Ybx1P62960 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ybx1P62960 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ybx1P62960 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Ybx1P62960 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ybx1P62960 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ybx1P62960 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.74□□□□□ -0.05
Ybx1P62960 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ybx1P62960 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ybx1P62960 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ybx1P62960 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ybx1P62960 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ybx1P62960 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.73□□□□□ -0.05
Ybx1P62960 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.73□□□□□ -0.05
Ybx1P62960 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
Ybx1P62960 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ybx1P62960 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Ybx1P62960 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.73□□□□□ -0.05
Ybx1P62960 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.73□□□□□ -0.05
Ybx1P62960 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ybx1P62960 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.73□□□□□ -0.05
Ybx1P62960 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.73□□□□□ -0.05
Ybx1P62960 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.73□□□□□ -0.05
Ybx1P62960 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Ybx1P62960 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ybx1P62960 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.73□□□□□ -0.05
Ybx1P62960 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms