Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tpm1P58771 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tpm1P58771 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tpm1P58771 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tpm1P58771 Gm9682-201ENSMUST00000197505 556 ntBASIC16.11■□□□□ 0.17
Tpm1P58771 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.11■□□□□ 0.17
Tpm1P58771 Gm7787-201ENSMUST00000216858 688 ntBASIC16.11■□□□□ 0.17
Tpm1P58771 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Tpm1P58771 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Tpm1P58771 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tpm1P58771 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tpm1P58771 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tpm1P58771 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tpm1P58771 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Tpm1P58771 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tpm1P58771 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Tpm1P58771 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tpm1P58771 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tpm1P58771 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tpm1P58771 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Tpm1P58771 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tpm1P58771 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tpm1P58771 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tpm1P58771 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tpm1P58771 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tpm1P58771 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tpm1P58771 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tpm1P58771 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tpm1P58771 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Tpm1P58771 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tpm1P58771 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tpm1P58771 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tpm1P58771 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tpm1P58771 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tpm1P58771 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Tpm1P58771 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tpm1P58771 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Tpm1P58771 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tpm1P58771 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tpm1P58771 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.09■□□□□ 0.17
Tpm1P58771 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Tpm1P58771 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.09■□□□□ 0.17
Tpm1P58771 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tpm1P58771 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tpm1P58771 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tpm1P58771 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tpm1P58771 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tpm1P58771 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tpm1P58771 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.09■□□□□ 0.17
Tpm1P58771 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.09■□□□□ 0.17
Tpm1P58771 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.09■□□□□ 0.17
Tpm1P58771 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.09■□□□□ 0.17
Tpm1P58771 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tpm1P58771 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.09■□□□□ 0.17
Tpm1P58771 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.09■□□□□ 0.17
Tpm1P58771 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.09■□□□□ 0.17
Tpm1P58771 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tpm1P58771 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tpm1P58771 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tpm1P58771 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.09■□□□□ 0.17
Tpm1P58771 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tpm1P58771 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tpm1P58771 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tpm1P58771 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tpm1P58771 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tpm1P58771 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tpm1P58771 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.09■□□□□ 0.17
Tpm1P58771 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.09■□□□□ 0.17
Tpm1P58771 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tpm1P58771 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tpm1P58771 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tpm1P58771 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.09■□□□□ 0.17
Tpm1P58771 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tpm1P58771 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.09■□□□□ 0.17
Tpm1P58771 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tpm1P58771 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.08■□□□□ 0.17
Tpm1P58771 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Tpm1P58771 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Tpm1P58771 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tpm1P58771 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tpm1P58771 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tpm1P58771 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tpm1P58771 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tpm1P58771 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.08■□□□□ 0.16
Tpm1P58771 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Tpm1P58771 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tpm1P58771 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tpm1P58771 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tpm1P58771 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.08■□□□□ 0.16
Tpm1P58771 Mir7071-201ENSMUST00000184847 69 ntBASIC16.08■□□□□ 0.16
Tpm1P58771 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.08■□□□□ 0.16
Tpm1P58771 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tpm1P58771 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.08■□□□□ 0.16
Tpm1P58771 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.08■□□□□ 0.16
Tpm1P58771 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Tpm1P58771 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Tpm1P58771 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tpm1P58771 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tpm1P58771 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tpm1P58771 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms