Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rab4aP56371 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.4□□□□□ -0.58
Rab4aP56371 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC11.4□□□□□ -0.58
Rab4aP56371 Gm7370-201ENSMUST00000219471 767 ntBASIC11.4□□□□□ -0.58
Rab4aP56371 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rab4aP56371 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rab4aP56371 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rab4aP56371 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rab4aP56371 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Rab4aP56371 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Rab4aP56371 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rab4aP56371 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rab4aP56371 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Rab4aP56371 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rab4aP56371 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Rab4aP56371 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rab4aP56371 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Rab4aP56371 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC11.4□□□□□ -0.59
Rab4aP56371 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rab4aP56371 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rab4aP56371 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rab4aP56371 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Rab4aP56371 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC11.39□□□□□ -0.59
Rab4aP56371 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.39□□□□□ -0.59
Rab4aP56371 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.39□□□□□ -0.59
Rab4aP56371 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC11.39□□□□□ -0.59
Rab4aP56371 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC11.39□□□□□ -0.59
Rab4aP56371 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.39□□□□□ -0.59
Rab4aP56371 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Rab4aP56371 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Rab4aP56371 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.39□□□□□ -0.59
Rab4aP56371 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.39□□□□□ -0.59
Rab4aP56371 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Rab4aP56371 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab4aP56371 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Rab4aP56371 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab4aP56371 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab4aP56371 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab4aP56371 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Rab4aP56371 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab4aP56371 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab4aP56371 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC11.38□□□□□ -0.59
Rab4aP56371 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rab4aP56371 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.38□□□□□ -0.59
Rab4aP56371 Slc35b2-207ENSMUST00000226086 850 ntBASIC11.38□□□□□ -0.59
Rab4aP56371 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab4aP56371 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab4aP56371 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab4aP56371 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab4aP56371 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab4aP56371 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.38□□□□□ -0.59
Rab4aP56371 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab4aP56371 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab4aP56371 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab4aP56371 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab4aP56371 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab4aP56371 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab4aP56371 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab4aP56371 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab4aP56371 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.38□□□□□ -0.59
Rab4aP56371 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Rab4aP56371 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Rab4aP56371 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab4aP56371 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rab4aP56371 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab4aP56371 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rab4aP56371 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab4aP56371 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab4aP56371 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rab4aP56371 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab4aP56371 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rab4aP56371 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms