Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RoraP51448 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.65□□□□□ -0.22
RoraP51448 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.65□□□□□ -0.22
RoraP51448 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RoraP51448 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
RoraP51448 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
RoraP51448 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RoraP51448 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RoraP51448 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
RoraP51448 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
RoraP51448 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
RoraP51448 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
RoraP51448 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RoraP51448 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RoraP51448 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RoraP51448 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RoraP51448 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RoraP51448 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.64□□□□□ -0.23
RoraP51448 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RoraP51448 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RoraP51448 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RoraP51448 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RoraP51448 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RoraP51448 Gm24543-201ENSMUST00000103867 82 ntBASIC13.64□□□□□ -0.23
RoraP51448 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.64□□□□□ -0.23
RoraP51448 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RoraP51448 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RoraP51448 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.64□□□□□ -0.23
RoraP51448 Gm29310-201ENSMUST00000185468 696 ntBASIC13.64□□□□□ -0.23
RoraP51448 Gm21825-201ENSMUST00000185728 696 ntBASIC13.64□□□□□ -0.23
RoraP51448 Gm29109-201ENSMUST00000185895 696 ntBASIC13.64□□□□□ -0.23
RoraP51448 Gm21896-201ENSMUST00000186520 696 ntBASIC13.64□□□□□ -0.23
RoraP51448 Gm21873-201ENSMUST00000186728 696 ntBASIC13.64□□□□□ -0.23
RoraP51448 Gm21794-201ENSMUST00000187056 696 ntBASIC13.64□□□□□ -0.23
RoraP51448 Gm21880-201ENSMUST00000187275 696 ntBASIC13.64□□□□□ -0.23
RoraP51448 Gm21826-201ENSMUST00000187451 696 ntBASIC13.64□□□□□ -0.23
RoraP51448 Gm21198-201ENSMUST00000188393 696 ntBASIC13.64□□□□□ -0.23
RoraP51448 Gm21749-201ENSMUST00000189343 696 ntBASIC13.64□□□□□ -0.23
RoraP51448 Gm21901-201ENSMUST00000189568 696 ntBASIC13.64□□□□□ -0.23
RoraP51448 Gm29424-201ENSMUST00000189716 696 ntBASIC13.64□□□□□ -0.23
RoraP51448 Gm28599-201ENSMUST00000189838 694 ntBASIC13.64□□□□□ -0.23
RoraP51448 Gm21867-201ENSMUST00000189917 696 ntBASIC13.64□□□□□ -0.23
RoraP51448 Gm29269-201ENSMUST00000190087 696 ntBASIC13.64□□□□□ -0.23
RoraP51448 Gm21722-201ENSMUST00000190153 696 ntBASIC13.64□□□□□ -0.23
RoraP51448 Gm28423-201ENSMUST00000190701 696 ntBASIC13.64□□□□□ -0.23
RoraP51448 Gm21899-201ENSMUST00000190745 696 ntBASIC13.64□□□□□ -0.23
RoraP51448 Gm21910-201ENSMUST00000191163 696 ntBASIC13.64□□□□□ -0.23
RoraP51448 Gm21849-201ENSMUST00000191571 696 ntBASIC13.64□□□□□ -0.23
RoraP51448 Gm28678-201ENSMUST00000191593 696 ntBASIC13.64□□□□□ -0.23
RoraP51448 Gm20910-201ENSMUST00000193268 696 ntBASIC13.64□□□□□ -0.23
RoraP51448 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RoraP51448 Gm21871-201ENSMUST00000194621 696 ntBASIC13.64□□□□□ -0.23
RoraP51448 Gm44344-201ENSMUST00000200287 129 ntBASIC13.64□□□□□ -0.23
RoraP51448 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RoraP51448 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.64□□□□□ -0.23
RoraP51448 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RoraP51448 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RoraP51448 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RoraP51448 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RoraP51448 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RoraP51448 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RoraP51448 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RoraP51448 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RoraP51448 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RoraP51448 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RoraP51448 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RoraP51448 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RoraP51448 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
RoraP51448 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RoraP51448 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RoraP51448 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RoraP51448 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RoraP51448 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RoraP51448 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RoraP51448 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms