Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Sox2P48432 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Sox2P48432 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox2P48432 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sox2P48432 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox2P48432 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox2P48432 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox2P48432 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox2P48432 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sox2P48432 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox2P48432 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sox2P48432 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox2P48432 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox2P48432 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.53□□□□□ -0.24
Sox2P48432 Gm8749-201ENSMUST00000117737 331 ntBASIC13.53□□□□□ -0.24
Sox2P48432 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sox2P48432 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox2P48432 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.53□□□□□ -0.24
Sox2P48432 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.53□□□□□ -0.24
Sox2P48432 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.53□□□□□ -0.24
Sox2P48432 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.53□□□□□ -0.24
Sox2P48432 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox2P48432 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox2P48432 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox2P48432 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox2P48432 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox2P48432 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.53□□□□□ -0.24
Sox2P48432 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.53□□□□□ -0.24
Sox2P48432 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox2P48432 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox2P48432 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox2P48432 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox2P48432 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox2P48432 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox2P48432 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sox2P48432 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox2P48432 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sox2P48432 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.53□□□□□ -0.24
Sox2P48432 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox2P48432 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sox2P48432 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox2P48432 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox2P48432 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sox2P48432 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox2P48432 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox2P48432 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Sox2P48432 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Sox2P48432 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox2P48432 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sox2P48432 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sox2P48432 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox2P48432 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Sox2P48432 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox2P48432 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox2P48432 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sox2P48432 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sox2P48432 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
Sox2P48432 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox2P48432 Gm25990-201ENSMUST00000102440 86 ntBASIC13.52□□□□□ -0.25
Sox2P48432 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox2P48432 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.52□□□□□ -0.25
Sox2P48432 Gm13464-201ENSMUST00000119418 935 ntBASIC13.52□□□□□ -0.25
Sox2P48432 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.52□□□□□ -0.25
Sox2P48432 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox2P48432 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox2P48432 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Sox2P48432 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox2P48432 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.52□□□□□ -0.25
Sox2P48432 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.52□□□□□ -0.25
Sox2P48432 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.52□□□□□ -0.25
Sox2P48432 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox2P48432 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.52□□□□□ -0.25
Sox2P48432 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox2P48432 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Sox2P48432 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox2P48432 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.52□□□□□ -0.25
Sox2P48432 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.52□□□□□ -0.25
Sox2P48432 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.52□□□□□ -0.25
Sox2P48432 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox2P48432 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.52□□□□□ -0.25
Sox2P48432 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox2P48432 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox2P48432 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox2P48432 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox2P48432 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.52□□□□□ -0.25
Sox2P48432 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox2P48432 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sox2P48432 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox2P48432 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sox2P48432 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox2P48432 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox2P48432 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sox2P48432 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox2P48432 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Sox2P48432 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox2P48432 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox2P48432 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sox2P48432 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox2P48432 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sox2P48432 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms