Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.57□□□□□ -0.24
Sox6P40645 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.57□□□□□ -0.24
Sox6P40645 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.57□□□□□ -0.24
Sox6P40645 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.57□□□□□ -0.24
Sox6P40645 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Sox6P40645 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Sox6P40645 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Sox6P40645 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox6P40645 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox6P40645 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox6P40645 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.56□□□□□ -0.24
Sox6P40645 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox6P40645 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox6P40645 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.56□□□□□ -0.24
Sox6P40645 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox6P40645 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox6P40645 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox6P40645 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.56□□□□□ -0.24
Sox6P40645 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox6P40645 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox6P40645 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox6P40645 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox6P40645 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
Sox6P40645 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox6P40645 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.56□□□□□ -0.24
Sox6P40645 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox6P40645 Gm5364-201ENSMUST00000216789 889 ntBASIC13.56□□□□□ -0.24
Sox6P40645 Gm18246-201ENSMUST00000221023 728 ntBASIC13.56□□□□□ -0.24
Sox6P40645 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.56□□□□□ -0.24
Sox6P40645 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.56□□□□□ -0.24
Sox6P40645 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox6P40645 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox6P40645 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox6P40645 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.56□□□□□ -0.24
Sox6P40645 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox6P40645 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox6P40645 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox6P40645 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Sox6P40645 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox6P40645 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Sox6P40645 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox6P40645 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sox6P40645 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Sox6P40645 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox6P40645 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sox6P40645 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox6P40645 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox6P40645 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox6P40645 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox6P40645 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox6P40645 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox6P40645 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.55□□□□□ -0.24
Sox6P40645 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox6P40645 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox6P40645 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox6P40645 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox6P40645 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Sox6P40645 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox6P40645 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.55□□□□□ -0.24
Sox6P40645 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Sox6P40645 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.55□□□□□ -0.24
Sox6P40645 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Sox6P40645 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox6P40645 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.55□□□□□ -0.24
Sox6P40645 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sox6P40645 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox6P40645 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox6P40645 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sox6P40645 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Sox6P40645 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Sox6P40645 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Sox6P40645 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms