Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cd28P31041 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.72□□□□□ -0.37
Cd28P31041 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.72□□□□□ -0.37
Cd28P31041 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.72□□□□□ -0.37
Cd28P31041 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.72□□□□□ -0.37
Cd28P31041 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.72□□□□□ -0.37
Cd28P31041 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.72□□□□□ -0.37
Cd28P31041 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Cd28P31041 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cd28P31041 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cd28P31041 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cd28P31041 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cd28P31041 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cd28P31041 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cd28P31041 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd28P31041 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Cd28P31041 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cd28P31041 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cd28P31041 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Cd28P31041 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd28P31041 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd28P31041 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Cd28P31041 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd28P31041 Gm12895-201ENSMUST00000122214 226 ntBASIC12.71□□□□□ -0.37
Cd28P31041 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Cd28P31041 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd28P31041 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cd28P31041 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd28P31041 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cd28P31041 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd28P31041 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cd28P31041 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cd28P31041 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cd28P31041 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd28P31041 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cd28P31041 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cd28P31041 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.71□□□□□ -0.38
Cd28P31041 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.71□□□□□ -0.38
Cd28P31041 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.71□□□□□ -0.38
Cd28P31041 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cd28P31041 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.71□□□□□ -0.38
Cd28P31041 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cd28P31041 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cd28P31041 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd28P31041 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cd28P31041 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd28P31041 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.7□□□□□ -0.38
Cd28P31041 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.7□□□□□ -0.38
Cd28P31041 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd28P31041 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd28P31041 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cd28P31041 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd28P31041 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd28P31041 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd28P31041 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cd28P31041 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd28P31041 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cd28P31041 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cd28P31041 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd28P31041 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd28P31041 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cd28P31041 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd28P31041 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd28P31041 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.7□□□□□ -0.38
Cd28P31041 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd28P31041 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Cd28P31041 Gm11780-201ENSMUST00000136880 516 ntBASIC12.7□□□□□ -0.38
Cd28P31041 Gm9726-201ENSMUST00000180321 678 ntBASIC12.7□□□□□ -0.38
Cd28P31041 Gm27704-201ENSMUST00000185094 107 ntBASIC12.7□□□□□ -0.38
Cd28P31041 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.7□□□□□ -0.38
Cd28P31041 Gm37153-201ENSMUST00000193637 231 ntBASIC12.7□□□□□ -0.38
Cd28P31041 Gm9682-201ENSMUST00000197505 556 ntBASIC12.7□□□□□ -0.38
Cd28P31041 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Cd28P31041 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.7□□□□□ -0.38
Cd28P31041 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.7□□□□□ -0.38
Cd28P31041 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms