Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.08□□□□□ -0.32
VtnP29788 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.08□□□□□ -0.32
VtnP29788 Gm37230-201ENSMUST00000194491 818 ntBASIC13.08□□□□□ -0.32
VtnP29788 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VtnP29788 Gm5779-201ENSMUST00000218467 910 ntBASIC13.08□□□□□ -0.32
VtnP29788 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VtnP29788 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VtnP29788 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VtnP29788 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
VtnP29788 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VtnP29788 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VtnP29788 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
VtnP29788 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.08□□□□□ -0.32
VtnP29788 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VtnP29788 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VtnP29788 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VtnP29788 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VtnP29788 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
VtnP29788 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
VtnP29788 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
VtnP29788 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
VtnP29788 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.08□□□□□ -0.32
VtnP29788 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VtnP29788 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VtnP29788 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.07□□□□□ -0.32
VtnP29788 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.07□□□□□ -0.32
VtnP29788 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 Mir7023-201ENSMUST00000185093 64 ntBASIC13.07□□□□□ -0.32
VtnP29788 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.07□□□□□ -0.32
VtnP29788 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
VtnP29788 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
VtnP29788 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
VtnP29788 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
VtnP29788 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
VtnP29788 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VtnP29788 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.06□□□□□ -0.32
VtnP29788 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VtnP29788 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VtnP29788 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VtnP29788 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
VtnP29788 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
VtnP29788 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
VtnP29788 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VtnP29788 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VtnP29788 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
VtnP29788 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
VtnP29788 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
VtnP29788 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.06□□□□□ -0.32
VtnP29788 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.06□□□□□ -0.32
VtnP29788 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.06□□□□□ -0.32
VtnP29788 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.06□□□□□ -0.32
VtnP29788 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.06□□□□□ -0.32
VtnP29788 Gm10253-201ENSMUST00000194270 940 ntBASIC13.06□□□□□ -0.32
VtnP29788 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.06□□□□□ -0.32
VtnP29788 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.06□□□□□ -0.32
VtnP29788 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
VtnP29788 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VtnP29788 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VtnP29788 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VtnP29788 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VtnP29788 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.06□□□□□ -0.32
VtnP29788 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VtnP29788 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
VtnP29788 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VtnP29788 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
VtnP29788 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
VtnP29788 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VtnP29788 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VtnP29788 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VtnP29788 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VtnP29788 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VtnP29788 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VtnP29788 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
VtnP29788 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VtnP29788 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
VtnP29788 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
VtnP29788 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms