Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.8□□□□□ -0.04
Hoxd8P23463 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.8□□□□□ -0.04
Hoxd8P23463 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxd8P23463 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Hoxd8P23463 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Hoxd8P23463 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxd8P23463 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxd8P23463 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxd8P23463 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxd8P23463 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxd8P23463 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Hoxd8P23463 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxd8P23463 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd8P23463 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd8P23463 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd8P23463 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd8P23463 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd8P23463 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd8P23463 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd8P23463 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd8P23463 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd8P23463 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.79□□□□□ -0.04
Hoxd8P23463 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd8P23463 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Hoxd8P23463 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd8P23463 Gm8602-201ENSMUST00000184045 607 ntBASIC14.79□□□□□ -0.04
Hoxd8P23463 Gm18307-201ENSMUST00000206864 949 ntBASIC14.79□□□□□ -0.04
Hoxd8P23463 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.79□□□□□ -0.04
Hoxd8P23463 Gm5035-201ENSMUST00000215581 927 ntBASIC14.79□□□□□ -0.04
Hoxd8P23463 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Hoxd8P23463 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd8P23463 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd8P23463 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd8P23463 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd8P23463 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd8P23463 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd8P23463 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Hoxd8P23463 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Hoxd8P23463 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Hoxd8P23463 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Hoxd8P23463 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd8P23463 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.79□□□□□ -0.04
Hoxd8P23463 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd8P23463 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd8P23463 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Hoxd8P23463 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.78□□□□□ -0.04
Hoxd8P23463 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Hoxd8P23463 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.78□□□□□ -0.04
Hoxd8P23463 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.78□□□□□ -0.04
Hoxd8P23463 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.78□□□□□ -0.04
Hoxd8P23463 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Gm17150-201ENSMUST00000165577 381 ntBASIC14.78□□□□□ -0.04
Hoxd8P23463 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.78□□□□□ -0.04
Hoxd8P23463 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Hoxd8P23463 Gm18062-201ENSMUST00000208020 547 ntBASIC14.78□□□□□ -0.04
Hoxd8P23463 Gm18055-201ENSMUST00000208254 547 ntBASIC14.78□□□□□ -0.04
Hoxd8P23463 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.78□□□□□ -0.04
Hoxd8P23463 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.78□□□□□ -0.04
Hoxd8P23463 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.78□□□□□ -0.04
Hoxd8P23463 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.78□□□□□ -0.04
Hoxd8P23463 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Hoxd8P23463 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.78□□□□□ -0.04
Hoxd8P23463 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Hoxd8P23463 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxd8P23463 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxd8P23463 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxd8P23463 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Hoxd8P23463 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxd8P23463 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxd8P23463 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Hoxd8P23463 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxd8P23463 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxd8P23463 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
Hoxd8P23463 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Hoxd8P23463 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Hoxd8P23463 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms