Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Gm13223-201ENSMUST00000118609 747 ntBASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Gm16198-201ENSMUST00000118766 670 ntBASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Gm18057-201ENSMUST00000208220 503 ntBASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf9P20334 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Gm17837-201ENSMUST00000186435 985 ntBASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Gm45878-201ENSMUST00000211839 241 ntBASIC11.86□□□□□ -0.51
Tnfrsf9P20334 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Tnfrsf9P20334 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.85□□□□□ -0.51
Tnfrsf9P20334 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms