Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.96□□□□□ -0.49
Cxcl1P12850 Gm8597-201ENSMUST00000191525 1109 ntBASIC11.96□□□□□ -0.49
Cxcl1P12850 Gm43347-201ENSMUST00000200226 580 ntBASIC11.96□□□□□ -0.49
Cxcl1P12850 Gm6376-201ENSMUST00000209407 580 ntBASIC11.96□□□□□ -0.49
Cxcl1P12850 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.96□□□□□ -0.49
Cxcl1P12850 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cxcl1P12850 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Cxcl1P12850 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cxcl1P12850 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cxcl1P12850 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cxcl1P12850 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cxcl1P12850 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cxcl1P12850 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cxcl1P12850 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cxcl1P12850 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cxcl1P12850 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Cxcl1P12850 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cxcl1P12850 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cxcl1P12850 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cxcl1P12850 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cxcl1P12850 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cxcl1P12850 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cxcl1P12850 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cxcl1P12850 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.95□□□□□ -0.5
Cxcl1P12850 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.95□□□□□ -0.5
Cxcl1P12850 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cxcl1P12850 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cxcl1P12850 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.95□□□□□ -0.5
Cxcl1P12850 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cxcl1P12850 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Cxcl1P12850 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.95□□□□□ -0.5
Cxcl1P12850 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.95□□□□□ -0.5
Cxcl1P12850 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.95□□□□□ -0.5
Cxcl1P12850 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cxcl1P12850 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.95□□□□□ -0.5
Cxcl1P12850 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cxcl1P12850 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cxcl1P12850 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.94□□□□□ -0.5
Cxcl1P12850 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.94□□□□□ -0.5
Cxcl1P12850 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.94□□□□□ -0.5
Cxcl1P12850 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.94□□□□□ -0.5
Cxcl1P12850 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Cxcl1P12850 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.94□□□□□ -0.5
Cxcl1P12850 Gm9182-201ENSMUST00000217829 639 ntBASIC11.94□□□□□ -0.5
Cxcl1P12850 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cxcl1P12850 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms