Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UbbP0CG49 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
UbbP0CG49 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UbbP0CG49 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
UbbP0CG49 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UbbP0CG49 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
UbbP0CG49 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UbbP0CG49 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
UbbP0CG49 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
UbbP0CG49 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
UbbP0CG49 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
UbbP0CG49 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
UbbP0CG49 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.56□□□□□ -0.4
UbbP0CG49 Gm44357-201ENSMUST00000195897 142 ntBASIC12.56□□□□□ -0.4
UbbP0CG49 Gm19658-201ENSMUST00000196231 138 ntBASIC12.56□□□□□ -0.4
UbbP0CG49 Gm44367-201ENSMUST00000196836 138 ntBASIC12.56□□□□□ -0.4
UbbP0CG49 Gm44350-201ENSMUST00000197197 138 ntBASIC12.56□□□□□ -0.4
UbbP0CG49 Gm44390-201ENSMUST00000197533 144 ntBASIC12.56□□□□□ -0.4
UbbP0CG49 Gm44313-201ENSMUST00000198018 138 ntBASIC12.56□□□□□ -0.4
UbbP0CG49 Gm44486-201ENSMUST00000198508 138 ntBASIC12.56□□□□□ -0.4
UbbP0CG49 Gm44314-201ENSMUST00000199263 138 ntBASIC12.56□□□□□ -0.4
UbbP0CG49 Gm44394-201ENSMUST00000199558 138 ntBASIC12.56□□□□□ -0.4
UbbP0CG49 Gm44484-201ENSMUST00000199873 138 ntBASIC12.56□□□□□ -0.4
UbbP0CG49 Gm44466-201ENSMUST00000200264 138 ntBASIC12.56□□□□□ -0.4
UbbP0CG49 Gm44359-201ENSMUST00000200671 138 ntBASIC12.56□□□□□ -0.4
UbbP0CG49 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UbbP0CG49 Gm18246-201ENSMUST00000221023 728 ntBASIC12.56□□□□□ -0.4
UbbP0CG49 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UbbP0CG49 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
UbbP0CG49 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.56□□□□□ -0.4
UbbP0CG49 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
UbbP0CG49 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
UbbP0CG49 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
UbbP0CG49 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
UbbP0CG49 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UbbP0CG49 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
UbbP0CG49 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.56□□□□□ -0.4
UbbP0CG49 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.56□□□□□ -0.4
UbbP0CG49 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.56□□□□□ -0.4
UbbP0CG49 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
UbbP0CG49 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
UbbP0CG49 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
UbbP0CG49 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UbbP0CG49 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UbbP0CG49 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UbbP0CG49 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UbbP0CG49 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.55□□□□□ -0.4
UbbP0CG49 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UbbP0CG49 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UbbP0CG49 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UbbP0CG49 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.55□□□□□ -0.4
UbbP0CG49 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UbbP0CG49 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
UbbP0CG49 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
UbbP0CG49 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UbbP0CG49 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UbbP0CG49 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
UbbP0CG49 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.55□□□□□ -0.4
UbbP0CG49 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UbbP0CG49 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UbbP0CG49 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
UbbP0CG49 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
UbbP0CG49 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.55□□□□□ -0.4
UbbP0CG49 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UbbP0CG49 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.55□□□□□ -0.4
UbbP0CG49 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
UbbP0CG49 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UbbP0CG49 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
UbbP0CG49 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.55□□□□□ -0.4
UbbP0CG49 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UbbP0CG49 Matn2-206ENSMUST00000228570 2798 ntBASIC12.55□□□□□ -0.4
UbbP0CG49 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
UbbP0CG49 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
UbbP0CG49 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UbbP0CG49 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UbbP0CG49 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
UbbP0CG49 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.55□□□□□ -0.4
UbbP0CG49 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.55□□□□□ -0.4
UbbP0CG49 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
UbbP0CG49 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
UbbP0CG49 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UbbP0CG49 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UbbP0CG49 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
UbbP0CG49 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UbbP0CG49 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
UbbP0CG49 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UbbP0CG49 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UbbP0CG49 Gm13464-201ENSMUST00000119418 935 ntBASIC12.54□□□□□ -0.4
UbbP0CG49 Gm14042-201ENSMUST00000120139 833 ntBASIC12.54□□□□□ -0.4
UbbP0CG49 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.54□□□□□ -0.4
UbbP0CG49 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UbbP0CG49 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.54□□□□□ -0.4
UbbP0CG49 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.54□□□□□ -0.4
UbbP0CG49 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UbbP0CG49 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UbbP0CG49 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.54□□□□□ -0.4
UbbP0CG49 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UbbP0CG49 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UbbP0CG49 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UbbP0CG49 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms