Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P06344 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.86□□□□□ -0.35
P06344 Gm37230-201ENSMUST00000194491 818 ntBASIC12.86□□□□□ -0.35
P06344 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06344 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06344 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
P06344 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.86□□□□□ -0.35
P06344 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P06344 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06344 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06344 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06344 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06344 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06344 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06344 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06344 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06344 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.86□□□□□ -0.35
P06344 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
P06344 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06344 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06344 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P06344 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P06344 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
P06344 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
P06344 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
P06344 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
P06344 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.85□□□□□ -0.35
P06344 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.85□□□□□ -0.35
P06344 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
P06344 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Gm27622-201ENSMUST00000183779 60 ntBASIC12.85□□□□□ -0.35
P06344 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.85□□□□□ -0.35
P06344 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.85□□□□□ -0.35
P06344 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
P06344 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.85□□□□□ -0.35
P06344 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
P06344 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.84□□□□□ -0.35
P06344 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
P06344 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
P06344 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.84□□□□□ -0.35
P06344 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.84□□□□□ -0.35
P06344 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
P06344 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
P06344 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.84□□□□□ -0.35
P06344 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Gm27618-201ENSMUST00000183671 60 ntBASIC12.84□□□□□ -0.35
P06344 Gm28630-201ENSMUST00000187806 498 ntBASIC12.84□□□□□ -0.35
P06344 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.84□□□□□ -0.35
P06344 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.84□□□□□ -0.35
P06344 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
P06344 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
P06344 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms