Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hoxa3P02831 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxa3P02831 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxa3P02831 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Hoxa3P02831 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxa3P02831 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.11□□□□□ -0.47
Hoxa3P02831 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxa3P02831 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxa3P02831 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxa3P02831 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxa3P02831 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxa3P02831 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxa3P02831 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.11□□□□□ -0.47
Hoxa3P02831 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxa3P02831 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxa3P02831 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxa3P02831 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxa3P02831 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxa3P02831 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxa3P02831 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxa3P02831 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxa3P02831 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.11□□□□□ -0.47
Hoxa3P02831 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxa3P02831 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxa3P02831 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxa3P02831 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Hoxa3P02831 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.11□□□□□ -0.47
Hoxa3P02831 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxa3P02831 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Hoxa3P02831 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Hoxa3P02831 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Hoxa3P02831 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxa3P02831 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxa3P02831 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Hoxa3P02831 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Hoxa3P02831 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Hoxa3P02831 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.1□□□□□ -0.47
Hoxa3P02831 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.1□□□□□ -0.47
Hoxa3P02831 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.1□□□□□ -0.47
Hoxa3P02831 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.1□□□□□ -0.47
Hoxa3P02831 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Hoxa3P02831 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Hoxa3P02831 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.1□□□□□ -0.47
Hoxa3P02831 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.1□□□□□ -0.47
Hoxa3P02831 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
Hoxa3P02831 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.1□□□□□ -0.47
Hoxa3P02831 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Hoxa3P02831 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.1□□□□□ -0.47
Hoxa3P02831 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Hoxa3P02831 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.1□□□□□ -0.47
Hoxa3P02831 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxa3P02831 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Hoxa3P02831 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Hoxa3P02831 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
Hoxa3P02831 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.09□□□□□ -0.47
Hoxa3P02831 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa3P02831 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Hoxa3P02831 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.09□□□□□ -0.47
Hoxa3P02831 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.09□□□□□ -0.47
Hoxa3P02831 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa3P02831 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxa3P02831 Gm18766-201ENSMUST00000189811 808 ntBASIC12.09□□□□□ -0.47
Hoxa3P02831 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.09□□□□□ -0.47
Hoxa3P02831 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms