Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a1P02463 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col4a1P02463 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Col4a1P02463 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Col4a1P02463 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a1P02463 AC125117.1-201ENSMUST00000228121 468 ntBASIC17.43■□□□□ 0.38
Col4a1P02463 Gm10012-201ENSMUST00000078252 192 ntBASIC17.43■□□□□ 0.38
Col4a1P02463 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a1P02463 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.43■□□□□ 0.38
Col4a1P02463 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a1P02463 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a1P02463 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a1P02463 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a1P02463 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a1P02463 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a1P02463 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a1P02463 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Col4a1P02463 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a1P02463 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a1P02463 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a1P02463 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col4a1P02463 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a1P02463 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a1P02463 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Col4a1P02463 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a1P02463 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC17.42■□□□□ 0.38
Col4a1P02463 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC17.42■□□□□ 0.38
Col4a1P02463 Snora78-201ENSMUST00000158630 128 ntBASIC17.42■□□□□ 0.38
Col4a1P02463 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC17.42■□□□□ 0.38
Col4a1P02463 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a1P02463 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a1P02463 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Col4a1P02463 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a1P02463 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a1P02463 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a1P02463 Gm9347-201ENSMUST00000211473 1607 ntBASIC17.42■□□□□ 0.38
Col4a1P02463 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a1P02463 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a1P02463 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Col4a1P02463 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.42■□□□□ 0.38
Col4a1P02463 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a1P02463 Gm13050-201ENSMUST00000122149 1345 ntBASIC17.42■□□□□ 0.38
Col4a1P02463 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a1P02463 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a1P02463 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a1P02463 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a1P02463 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a1P02463 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a1P02463 Gm13612-201ENSMUST00000119276 390 ntBASIC17.42■□□□□ 0.38
Col4a1P02463 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a1P02463 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a1P02463 Gm37424-201ENSMUST00000191727 561 ntBASIC17.42■□□□□ 0.38
Col4a1P02463 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC17.42■□□□□ 0.38
Col4a1P02463 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a1P02463 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a1P02463 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col4a1P02463 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a1P02463 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a1P02463 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a1P02463 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a1P02463 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.41■□□□□ 0.38
Col4a1P02463 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Col4a1P02463 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a1P02463 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a1P02463 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC17.41■□□□□ 0.38
Col4a1P02463 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC17.41■□□□□ 0.38
Col4a1P02463 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Col4a1P02463 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Col4a1P02463 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a1P02463 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a1P02463 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col4a1P02463 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Col4a1P02463 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.4■□□□□ 0.38
Col4a1P02463 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a1P02463 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC17.4■□□□□ 0.38
Col4a1P02463 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a1P02463 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a1P02463 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Col4a1P02463 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC17.4■□□□□ 0.38
Col4a1P02463 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC17.4■□□□□ 0.38
Col4a1P02463 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a1P02463 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Col4a1P02463 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC17.4■□□□□ 0.38
Col4a1P02463 Proscos-202ENSMUST00000178990 666 ntBASIC17.4■□□□□ 0.38
Col4a1P02463 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC17.4■□□□□ 0.38
Col4a1P02463 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a1P02463 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a1P02463 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a1P02463 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a1P02463 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a1P02463 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a1P02463 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a1P02463 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a1P02463 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a1P02463 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col4a1P02463 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Col4a1P02463 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.39■□□□□ 0.38
Col4a1P02463 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.38
Col4a1P02463 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
Col4a1P02463 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms