Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IghmP01872 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
IghmP01872 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IghmP01872 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IghmP01872 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
IghmP01872 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IghmP01872 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IghmP01872 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IghmP01872 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IghmP01872 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IghmP01872 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.5□□□□□ -0.25
IghmP01872 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IghmP01872 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
IghmP01872 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
IghmP01872 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
IghmP01872 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
IghmP01872 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
IghmP01872 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
IghmP01872 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
IghmP01872 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
IghmP01872 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.49□□□□□ -0.25
IghmP01872 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Mir8117-201ENSMUST00000184773 107 ntBASIC13.49□□□□□ -0.25
IghmP01872 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.49□□□□□ -0.25
IghmP01872 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.49□□□□□ -0.25
IghmP01872 Gm20553-201ENSMUST00000204205 844 ntBASIC13.49□□□□□ -0.25
IghmP01872 Gm5364-201ENSMUST00000216789 889 ntBASIC13.49□□□□□ -0.25
IghmP01872 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
IghmP01872 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
IghmP01872 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
IghmP01872 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
IghmP01872 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.49□□□□□ -0.25
IghmP01872 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.48□□□□□ -0.25
IghmP01872 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.48□□□□□ -0.25
IghmP01872 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
IghmP01872 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.48□□□□□ -0.25
IghmP01872 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.48□□□□□ -0.25
IghmP01872 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.48□□□□□ -0.25
IghmP01872 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.48□□□□□ -0.25
IghmP01872 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.48□□□□□ -0.25
IghmP01872 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
IghmP01872 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.48□□□□□ -0.25
IghmP01872 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IghmP01872 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms