Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Rprl3-201ENSMUST00000157400 290 ntBASIC10.55□□□□□ -0.72
TcraP01849 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC10.55□□□□□ -0.72
TcraP01849 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC10.55□□□□□ -0.72
TcraP01849 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 AC130713.1-201ENSMUST00000228853 1096 ntBASIC10.55□□□□□ -0.72
TcraP01849 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
TcraP01849 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
TcraP01849 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Mmp14-206ENSMUST00000225641 3238 ntBASIC10.55□□□□□ -0.72
TcraP01849 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
TcraP01849 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
TcraP01849 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC10.55□□□□□ -0.72
TcraP01849 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TcraP01849 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.55□□□□□ -0.72
TcraP01849 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
TcraP01849 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC10.54□□□□□ -0.72
TcraP01849 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Gm13312-201ENSMUST00000119631 718 ntBASIC10.54□□□□□ -0.72
TcraP01849 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
TcraP01849 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
TcraP01849 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
TcraP01849 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
TcraP01849 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
TcraP01849 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
TcraP01849 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC10.54□□□□□ -0.72
TcraP01849 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
TcraP01849 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
TcraP01849 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
TcraP01849 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TcraP01849 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TcraP01849 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TcraP01849 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TcraP01849 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TcraP01849 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
TcraP01849 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
TcraP01849 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
TcraP01849 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TcraP01849 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
TcraP01849 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
TcraP01849 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TcraP01849 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
TcraP01849 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
TcraP01849 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TcraP01849 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TcraP01849 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
TcraP01849 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC10.53□□□□□ -0.72
TcraP01849 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
TcraP01849 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC10.53□□□□□ -0.72
TcraP01849 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC10.53□□□□□ -0.72
TcraP01849 Gm19164-201ENSMUST00000210667 640 ntBASIC10.53□□□□□ -0.72
TcraP01849 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
TcraP01849 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TcraP01849 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
TcraP01849 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TcraP01849 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms