Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.1□□□□□ -0.31
Lmx1bO88609 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lmx1bO88609 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lmx1bO88609 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lmx1bO88609 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lmx1bO88609 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lmx1bO88609 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lmx1bO88609 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lmx1bO88609 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.1□□□□□ -0.31
Lmx1bO88609 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lmx1bO88609 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Lmx1bO88609 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lmx1bO88609 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Lmx1bO88609 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.09□□□□□ -0.31
Lmx1bO88609 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Lmx1bO88609 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.09□□□□□ -0.31
Lmx1bO88609 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.09□□□□□ -0.31
Lmx1bO88609 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.09□□□□□ -0.31
Lmx1bO88609 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.09□□□□□ -0.31
Lmx1bO88609 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lmx1bO88609 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lmx1bO88609 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.08□□□□□ -0.31
Lmx1bO88609 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lmx1bO88609 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lmx1bO88609 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lmx1bO88609 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lmx1bO88609 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lmx1bO88609 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Lmx1bO88609 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.08□□□□□ -0.32
Lmx1bO88609 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.08□□□□□ -0.32
Lmx1bO88609 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lmx1bO88609 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Lmx1bO88609 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lmx1bO88609 Gm28630-201ENSMUST00000187806 498 ntBASIC13.08□□□□□ -0.32
Lmx1bO88609 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Lmx1bO88609 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lmx1bO88609 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lmx1bO88609 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Lmx1bO88609 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lmx1bO88609 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lmx1bO88609 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lmx1bO88609 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lmx1bO88609 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Lmx1bO88609 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.08□□□□□ -0.32
Lmx1bO88609 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lmx1bO88609 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lmx1bO88609 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lmx1bO88609 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lmx1bO88609 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lmx1bO88609 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lmx1bO88609 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lmx1bO88609 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lmx1bO88609 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lmx1bO88609 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lmx1bO88609 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lmx1bO88609 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lmx1bO88609 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lmx1bO88609 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lmx1bO88609 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lmx1bO88609 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lmx1bO88609 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.07□□□□□ -0.32
Lmx1bO88609 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.07□□□□□ -0.32
Lmx1bO88609 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lmx1bO88609 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Lmx1bO88609 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.07□□□□□ -0.32
Lmx1bO88609 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lmx1bO88609 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lmx1bO88609 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.07□□□□□ -0.32
Lmx1bO88609 Gm13464-201ENSMUST00000119418 935 ntBASIC13.07□□□□□ -0.32
Lmx1bO88609 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lmx1bO88609 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lmx1bO88609 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.07□□□□□ -0.32
Lmx1bO88609 Gm27989-201ENSMUST00000184721 107 ntBASIC13.07□□□□□ -0.32
Lmx1bO88609 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lmx1bO88609 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms