Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pdlim1O70400 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pdlim1O70400 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.25□□□□□ -0.13
Pdlim1O70400 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Gm6222-201ENSMUST00000120787 396 ntBASIC14.25□□□□□ -0.13
Pdlim1O70400 Gm12882-201ENSMUST00000121696 517 ntBASIC14.25□□□□□ -0.13
Pdlim1O70400 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.25□□□□□ -0.13
Pdlim1O70400 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pdlim1O70400 Gm9719-201ENSMUST00000162765 543 ntBASIC14.25□□□□□ -0.13
Pdlim1O70400 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 AA619741-201ENSMUST00000195095 646 ntBASIC14.25□□□□□ -0.13
Pdlim1O70400 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pdlim1O70400 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pdlim1O70400 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pdlim1O70400 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pdlim1O70400 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Pdlim1O70400 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdlim1O70400 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pdlim1O70400 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim1O70400 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim1O70400 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim1O70400 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim1O70400 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim1O70400 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim1O70400 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.24□□□□□ -0.13
Pdlim1O70400 Gm6415-201ENSMUST00000118488 348 ntBASIC14.24□□□□□ -0.13
Pdlim1O70400 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim1O70400 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim1O70400 Gm25948-201ENSMUST00000175334 112 ntBASIC14.24□□□□□ -0.13
Pdlim1O70400 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim1O70400 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Pdlim1O70400 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.24□□□□□ -0.13
Pdlim1O70400 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim1O70400 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim1O70400 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim1O70400 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.24□□□□□ -0.13
Pdlim1O70400 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.24□□□□□ -0.13
Pdlim1O70400 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim1O70400 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim1O70400 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim1O70400 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim1O70400 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pdlim1O70400 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pdlim1O70400 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim1O70400 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.23□□□□□ -0.13
Pdlim1O70400 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim1O70400 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Pdlim1O70400 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim1O70400 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim1O70400 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Pdlim1O70400 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Pdlim1O70400 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim1O70400 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Pdlim1O70400 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.23□□□□□ -0.13
Pdlim1O70400 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim1O70400 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.23□□□□□ -0.13
Pdlim1O70400 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.23□□□□□ -0.13
Pdlim1O70400 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim1O70400 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim1O70400 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim1O70400 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim1O70400 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.23□□□□□ -0.13
Pdlim1O70400 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Pdlim1O70400 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.23□□□□□ -0.13
Pdlim1O70400 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Pdlim1O70400 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Pdlim1O70400 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim1O70400 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim1O70400 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim1O70400 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pdlim1O70400 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim1O70400 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim1O70400 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pdlim1O70400 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pdlim1O70400 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pdlim1O70400 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pdlim1O70400 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim1O70400 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.22□□□□□ -0.13
Pdlim1O70400 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim1O70400 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pdlim1O70400 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim1O70400 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim1O70400 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pdlim1O70400 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim1O70400 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms