Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.38□□□□□ -0.59
Pde6dO55057 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pde6dO55057 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
Pde6dO55057 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pde6dO55057 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Pde6dO55057 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pde6dO55057 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Gm11453-201ENSMUST00000117318 1007 ntBASIC11.37□□□□□ -0.59
Pde6dO55057 Gm14042-201ENSMUST00000120139 833 ntBASIC11.37□□□□□ -0.59
Pde6dO55057 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.37□□□□□ -0.59
Pde6dO55057 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Pde6dO55057 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Pde6dO55057 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pde6dO55057 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pde6dO55057 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Pde6dO55057 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Pde6dO55057 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Pde6dO55057 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pde6dO55057 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.36□□□□□ -0.59
Pde6dO55057 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Pde6dO55057 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.36□□□□□ -0.59
Pde6dO55057 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.36□□□□□ -0.59
Pde6dO55057 AC093926.2-201ENSMUST00000214468 1228 ntBASIC11.36□□□□□ -0.59
Pde6dO55057 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.36□□□□□ -0.59
Pde6dO55057 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.36□□□□□ -0.59
Pde6dO55057 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Pde6dO55057 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Pde6dO55057 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pde6dO55057 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Pde6dO55057 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.35□□□□□ -0.59
Pde6dO55057 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.35□□□□□ -0.59
Pde6dO55057 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Pde6dO55057 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 Gm13559-201ENSMUST00000120476 863 ntBASIC11.35□□□□□ -0.59
Pde6dO55057 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC11.35□□□□□ -0.59
Pde6dO55057 Gm6623-201ENSMUST00000173570 544 ntBASIC11.35□□□□□ -0.59
Pde6dO55057 Gm22697-201ENSMUST00000175194 63 ntBASIC11.35□□□□□ -0.59
Pde6dO55057 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pde6dO55057 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Pde6dO55057 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms