Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm2O35900 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm2O35900 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm2O35900 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Lsm2O35900 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Lsm2O35900 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.85□□□□□ -0.35
Lsm2O35900 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm2O35900 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Lsm2O35900 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm2O35900 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm2O35900 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Lsm2O35900 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm2O35900 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm2O35900 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.85□□□□□ -0.35
Lsm2O35900 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm2O35900 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Lsm2O35900 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm2O35900 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm2O35900 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm2O35900 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm2O35900 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.85□□□□□ -0.35
Lsm2O35900 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm2O35900 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm2O35900 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.85□□□□□ -0.35
Lsm2O35900 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Lsm2O35900 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm2O35900 Acot6-202ENSMUST00000222921 3622 ntBASIC12.85□□□□□ -0.35
Lsm2O35900 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm2O35900 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm2O35900 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm2O35900 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm2O35900 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm2O35900 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm2O35900 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.84□□□□□ -0.35
Lsm2O35900 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm2O35900 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Lsm2O35900 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.84□□□□□ -0.35
Lsm2O35900 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm2O35900 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.84□□□□□ -0.35
Lsm2O35900 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.84□□□□□ -0.35
Lsm2O35900 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm2O35900 Gm18246-201ENSMUST00000221023 728 ntBASIC12.84□□□□□ -0.35
Lsm2O35900 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.84□□□□□ -0.35
Lsm2O35900 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm2O35900 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm2O35900 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm2O35900 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm2O35900 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm2O35900 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm2O35900 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm2O35900 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.84□□□□□ -0.35
Lsm2O35900 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm2O35900 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm2O35900 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm2O35900 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm2O35900 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.84□□□□□ -0.35
Lsm2O35900 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Lsm2O35900 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm2O35900 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
Lsm2O35900 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.83□□□□□ -0.35
Lsm2O35900 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Lsm2O35900 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lsm2O35900 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Lsm2O35900 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lsm2O35900 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lsm2O35900 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Lsm2O35900 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.83□□□□□ -0.35
Lsm2O35900 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Lsm2O35900 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm2O35900 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm2O35900 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm2O35900 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm2O35900 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm2O35900 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm2O35900 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
Lsm2O35900 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Lsm2O35900 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm2O35900 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.83□□□□□ -0.36
Lsm2O35900 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm2O35900 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm2O35900 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.83□□□□□ -0.36
Lsm2O35900 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm2O35900 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm2O35900 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Lsm2O35900 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Lsm2O35900 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.83□□□□□ -0.36
Lsm2O35900 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm2O35900 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm2O35900 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm2O35900 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm2O35900 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Lsm2O35900 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.83□□□□□ -0.36
Lsm2O35900 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm2O35900 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm2O35900 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm2O35900 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm2O35900 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm2O35900 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm2O35900 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm2O35900 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms