Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Nr1i3O35627 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.49■□□□□ 0.07
Nr1i3O35627 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.49■□□□□ 0.07
Nr1i3O35627 Gm15427-201ENSMUST00000117288 531 ntBASIC15.49■□□□□ 0.07
Nr1i3O35627 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.49■□□□□ 0.07
Nr1i3O35627 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Nr1i3O35627 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Nr1i3O35627 Mir8117-201ENSMUST00000184773 107 ntBASIC15.49■□□□□ 0.07
Nr1i3O35627 Gm44492-201ENSMUST00000197012 141 ntBASIC15.49■□□□□ 0.07
Nr1i3O35627 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Nr1i3O35627 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.49■□□□□ 0.07
Nr1i3O35627 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nr1i3O35627 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nr1i3O35627 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nr1i3O35627 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Nr1i3O35627 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nr1i3O35627 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.49■□□□□ 0.07
Nr1i3O35627 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nr1i3O35627 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nr1i3O35627 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nr1i3O35627 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Nr1i3O35627 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nr1i3O35627 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nr1i3O35627 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.48■□□□□ 0.07
Nr1i3O35627 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nr1i3O35627 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nr1i3O35627 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nr1i3O35627 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nr1i3O35627 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Nr1i3O35627 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nr1i3O35627 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nr1i3O35627 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
Nr1i3O35627 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.48■□□□□ 0.07
Nr1i3O35627 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nr1i3O35627 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nr1i3O35627 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Nr1i3O35627 Gm1401-201ENSMUST00000122048 772 ntBASIC15.48■□□□□ 0.07
Nr1i3O35627 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.48■□□□□ 0.07
Nr1i3O35627 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
Nr1i3O35627 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Nr1i3O35627 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nr1i3O35627 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.48■□□□□ 0.07
Nr1i3O35627 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nr1i3O35627 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nr1i3O35627 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nr1i3O35627 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nr1i3O35627 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.48■□□□□ 0.07
Nr1i3O35627 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nr1i3O35627 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Nr1i3O35627 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Nr1i3O35627 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nr1i3O35627 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nr1i3O35627 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nr1i3O35627 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nr1i3O35627 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nr1i3O35627 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Nr1i3O35627 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nr1i3O35627 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.47■□□□□ 0.07
Nr1i3O35627 Gm6973-201ENSMUST00000117080 721 ntBASIC15.47■□□□□ 0.07
Nr1i3O35627 Gm11543-201ENSMUST00000120758 370 ntBASIC15.47■□□□□ 0.07
Nr1i3O35627 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nr1i3O35627 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nr1i3O35627 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nr1i3O35627 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nr1i3O35627 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nr1i3O35627 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nr1i3O35627 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Nr1i3O35627 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nr1i3O35627 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nr1i3O35627 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Nr1i3O35627 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nr1i3O35627 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
Nr1i3O35627 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
Nr1i3O35627 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.46■□□□□ 0.07
Nr1i3O35627 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nr1i3O35627 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Nr1i3O35627 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nr1i3O35627 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Nr1i3O35627 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nr1i3O35627 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nr1i3O35627 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nr1i3O35627 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Nr1i3O35627 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.46■□□□□ 0.07
Nr1i3O35627 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nr1i3O35627 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nr1i3O35627 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nr1i3O35627 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nr1i3O35627 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nr1i3O35627 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nr1i3O35627 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.46■□□□□ 0.07
Nr1i3O35627 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nr1i3O35627 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.46■□□□□ 0.07
Nr1i3O35627 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nr1i3O35627 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Nr1i3O35627 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.46■□□□□ 0.07
Nr1i3O35627 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.46■□□□□ 0.07
Nr1i3O35627 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.46■□□□□ 0.07
Nr1i3O35627 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nr1i3O35627 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.46■□□□□ 0.07
Nr1i3O35627 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms